Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2869 96.9 1e-14 seq2785 96.9 1e-14 >seq2869 Length=12581 Score = 96.9 bits (106), Expect = 1e-14 Identities = 180/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| ||| | || |||||||||||| ||| ||| || ||||| ||||||| ||| Sbjct 5131 CTCGACCAAGTGGCCGATGGTCATGCGCGAGGGGATGGCGTGGGGGTTGATGATGAGGTC 5072 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCG-TTGA 449105 |||||| ||||| | ||| ||||||||||||| |||| | | | |||| ||| Sbjct 5071 GGGCGTGACGCCGTCGGCGGTGAAGGGCATGTCTTCGGTGCGGTAGGTGATGCCGATTGT 5012 Query 449106 CGCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAG 449164 | |||||||| ||||| || | || |||||| || ||| || ||| ||| || || Sbjct 5011 C-CCCTTCTGCCCGTGACGCGACGC-GAACTTATCGCCCGTCTGCGGCACGCGCGTCGAG 4954 Query 449165 CGCAGCACGATCTTGATGGAGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCC 449224 |||| || ||||| | | || ||| ||| ||| || ||| | ||| || Sbjct 4953 CGCACGCGGACCTTGACGAACTTGAGGCCCTCCTGGTTCGTCGTGATCAGCACCTGGTCG 4894 Query 449225 ACGACGGCGTCGTCGGTGC 449243 |||| | ||| ||||||| Sbjct 4893 ACGATGCCGTTCTCGGTGC 4875 >seq2785 Length=13414 Score = 96.9 bits (106), Expect = 1e-14 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 349032 CGAGGTAGACCG-ACGCATTGGGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTG 349090 |||||||||||| | || |||| |||| || |||| || | ||| || |||||||| Sbjct 12027 CGAGGTAGACCGTAAGCGA-GGGCGTCTTGATGTTGGTCGCGACGTTGATGATCTCCTTC 11969 Query 349091 AGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGG 349150 || | || | || || || ||||||||| || ||| ||||| ||||||| || | | Sbjct 11968 AGACGAGGGACACCGAGCGTGACGTTCTTGCTCGAGACACCGGCGTAGTGGAACGTGTTG 11909 Query 349151 AGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCG 349210 || |||| |||||| ||||||||||| |||| | ||||| |||| |||||| Sbjct 11908 AGCGTCATCTGCGTCGCCGGCTCGCCGATAGACTGCGCAGCGAGCGTGCCGCACATCTCA 11849 Query 349211 CCGGG 349215 || || Sbjct 11848 CCCGG 11844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084657332291616