Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 246 2e-60 seq7 150 1e-31 seq1 93.3 3e-14 >seq5 Length=1773785 Score = 246 bits (272), Expect = 2e-60 Identities = 619/934 (66%), Gaps = 10/934 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| ||| || || || || |||||||||||||| || | |||||| || | | Sbjct 910012 ACAAACGCGGGGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCGGGGGAAGAG 909953 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| || || |||||||| || | | || ||||| | | || || ||| Sbjct 909952 TACTCGATGATCTCAGTGCACAGGTTGGAGGACTTGATCGTGCCGAGGTGTTGCTGGTTA 909893 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||| ||| || || ||||| | |||||| || || || ||||| |||| | Sbjct 909892 GACTTGGCGTTGGCGGCGTCTTTGTAGAGCATGTATGGGGTACCAGTCTCGGTCTGGGCC 909833 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCG 66231 || | |||||| ||| || | || || | || | | | |||| || || Sbjct 909832 TCGAGAATGGCGAACCAGAGCTTTTGCGCTTTGATGGT-CTTTCGTCCCTTTCCAGCACG 909774 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 ||||| |||||||| | ||| || | | || |||| || | || || Sbjct 909773 CTCGTAGCCCTCGTAGAGCTTTTCAAACTCGGCGCTGTGGACATCGGCGAGGCCGGGGCA 909714 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 | | || ||||| || | ||| ||||||||| || || || ||| || ||||| Sbjct 909713 TTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAGATC 909654 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 || ||||||||||||||||||||||| |||||||| || || | ||||| || || Sbjct 909653 GGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTTCTT 909594 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 | | ||||||||| || |||| |||||| |||||||| || |||||||||||||||| Sbjct 909593 TCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGC 909534 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || || ||| |||||| |||||||| || || || || | | | | | Sbjct 909533 ACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGCCCTTAG 909474 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || |||| ||||| || | || ||||| ||| | ||| ||| || || || Sbjct 909473 CATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTTGGCTCG 909414 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC 66651 || | ||||| | ||||| ||||||||||| ||||| ||||| || || || Sbjct 909413 GATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCA---GGT 909357 Query 66652 C---ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 | | ||| | | || ||||| || ||||| | |||| | |||| | || || Sbjct 909356 CTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACACGA 909297 Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768 | |||||| |||||||| | | ||| | || || | ||||| |||||||| Sbjct 909296 GGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAAGTA 909237 Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 | |||||| ||||| ||||||| ||| |||||||| | || || || || Sbjct 909236 TCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCGTGGATACC 909177 Query 66829 GAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCA 66887 || || ||| ||||| | | || ||||| |||||||| | | | ||||| || Sbjct 909176 GACGGCGACA-CGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATTCTCA 909118 Query 66888 TTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAA 66921 | |||||| || || |||||||||| ||| || Sbjct 909117 AGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAA 909084 >seq7 Length=1004146 Score = 150 bits (166), Expect = 1e-31 Identities = 397/598 (66%), Gaps = 15/598 (3%) Strand=Plus/Minus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GC 61378 || |||||| ||||||| |||| ||| | | |||||||| || ||||||| ||| || Sbjct 957344 CAGGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATCGACACATACATCAAGGACGC 957285 Query 61379 GGGCGGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGA 61435 | | || |||| || ||||| | || ||||| || || || | || | Sbjct 957284 CGCCCGAC---GAAC-ATACCTGTTCGAGGCTATCGACACCATCCCCTGCATCCAGAAAA 957229 Query 61436 AAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATT 61493 | || | |||||| |||| |||||| | | || || | | || || | ||| ||| | Sbjct 957228 AGGCCAACTGGGCCCTCAAGTGGATCTC--GGACGACCGATCGACTTTCGCTGAGCGACT 957171 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | | || ||||| | ||||||||| | || ||| ||| || || ||| | ||||| || Sbjct 957170 GATCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCTTTCGCCTCGATCTTCTG 957111 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 ||||||||| || || || |||||||| || |||||| || |||||||| || | || Sbjct 957110 GTTGAAGAAGCGAGGTCTCATGCCCGGACTCACCTTCTCGAACGAGTTGATCTCGAGGGA 957051 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 |||||| | || || ||||| | | || |||| | | || | || || || Sbjct 957050 CGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTCACCCAC-CTCCGACGA--CGACC 956994 Query 61674 GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 || ||| | ||| | ||||| || | ||||| || || || || Sbjct 956993 CCACCCAGACACTGTCGAGAGGATCATCAAAGAGGCCGTCAAGATCGAGCAAGAGTTCCT 956934 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 || |||||| |||| ||||| ||||| || ||||| | | || |||| ||||| || Sbjct 956933 CACCGACGCTCTGCCAGTCTCGCTCATTGGAATGAACTCTAAGCTCATGTGCCAGTACAT 956874 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 || ||||| |||||||| ||| | |||| | |||| | | | | || | Sbjct 956873 CGAGTTTGTCGCCGACCGACTGCTTGTCGCCCTTGGTAACGACAAGGTGTGGAACGTGTC 956814 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 ||||| || || || ||||| ||||| ||||| | |||||| | || || |||||| Sbjct 956813 CAACCCCTTCGACTTTATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAG 956756 >seq1 Length=8012737 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/118 (79%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 |||||||| | || ||| ||| || |||||||| ||||| ||||||||||| | || Sbjct 7388761 GTCGAGGGAATCTTCTTCTCTGGCTCCTTTGCCGCCATCTTCTGGTTGAAGAAGAGGGGT 7388702 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT-ATCACGCGACGAGGGCATGCAT 61626 || |||||||| ||||| ||| |||||||||||| | || | |||||||| | |||| Sbjct 7388701 CTCATGCCCGGCCTGACTTTCTCCAATGAGTTGATCAGCA-GGGACGAGGGAACGCAT 7388645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567961237120