Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq252 468 2e-129 seq142 468 2e-129 seq118 468 2e-129 >seq252 Length=544549 Score = 468 bits (518), Expect = 2e-129 Identities = 527/695 (76%), Gaps = 39/695 (6%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 54089 TGTGATGCGGCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAATGGGTGGTAAAT 54148 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | |||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 54149 TCCATCTAAAGCTAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 54208 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||| | | ||| |||||| || | |||||||||| ||||| || Sbjct 54209 TGAAAAGCACTTCGTTAGGAGGGTTAAACAGTATGTGAAATTGTCAGCGCGGAAGG--TT 54266 Query 203 GCAAC--CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCC-GGTGCACT--CTTCT 257 | | ||| | ||| | ||| || || | || |||| | | || || Sbjct 54267 ACGTCGTCAGTCATGCTTTGTGGGATTCAGCCTCGCCTTGTGCTTGGTGTATTTCCTGCT 54326 Query 258 GCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTG--GCCCCC 315 |||| |||| ||||||| | | || ||||||| ||| |||||||||| || | Sbjct 54327 GCGG-CAGGTCAGCATCGATTTTGTGGGCCGGATAAGGGCGTCGGGAATGTGATGCACGT 54385 Query 316 TT-----CGGGGGGTGTT-ATAGCCCGGGGTGGAATGCGGCCCG------CCTGGACTGA 363 || ||| | |||| |||||||| | | || ||||||| | ||| | Sbjct 54386 TTTACGACGGCGCATGTTTATAGCCCGACGCTGGATACGGCCCGTGGGATCGAGGAACGC 54445 Query 364 GGTC-CGCGCTC-------CGGCTAG------GATGCTGGCGTAATGGTTGTAAGCGGCC 409 ||| | |||| || | || |||||||||||||||| | || Sbjct 54446 AGTCTCTCGCTTACACAATCGTCGAGACTTTGGATGCTGGCGTAATGGCGACGTGACACC 54505 Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCG 469 ||||||| |||||||||||||||||||| | | ||||||| |||||||| |||||||| Sbjct 54506 CGTCTTGAAACACGGACCAAGGAGTCTAGGACATGTGCGAGTCTTTGGGTGGCAAACCCG 54565 Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529 || ||| |||||||||||| |||||||||| || | || ||||||||||||||||| Sbjct 54566 TGGGCGCAATGAAAGTGAATGGAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCCG 54623 Query 530 GATGTCTT-CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAAC 588 || | || |||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 54624 GAAGAATTTCGGAAGGATTTGAGTAAGAGCACGTGCCCTGGGACCCGAAAGATGGTGAAC 54683 Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || Sbjct 54684 TATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACG 54743 Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||||||| Sbjct 54744 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 54778 >seq142 Length=2585 Score = 468 bits (518), Expect = 2e-129 Identities = 527/695 (76%), Gaps = 39/695 (6%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 2325 TGTGATGCGGCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAATGGGTGGTAAAT 2266 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | |||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 2265 TCCATCTAAAGCTAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 2206 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||| | | ||| |||||| || | |||||||||| ||||| || Sbjct 2205 TGAAAAGCACTTCGTTAGGAGGGTTAAACAGTATGTGAAATTGTCAGCGCGGAAGG--TT 2148 Query 203 GCAAC--CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCC-GGTGCACT--CTTCT 257 | | ||| | ||| | ||| || || | || |||| | | || || Sbjct 2147 ACGTCGTCAGTCATGCTTTGTGGGATTCAGCCTCGCCTTGTGCTTGGTGTATTTCCTGCT 2088 Query 258 GCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTG--GCCCCC 315 |||| |||| ||||||| | | || ||||||| ||| |||||||||| || | Sbjct 2087 GCGG-CAGGTCAGCATCGATTTTGTGGGCCGGATAAGGGCGTCGGGAATGTGATGCACGT 2029 Query 316 TT-----CGGGGGGTGTT-ATAGCCCGGGGTGGAATGCGGCCCG------CCTGGACTGA 363 || ||| | |||| |||||||| | | || ||||||| | ||| | Sbjct 2028 TTTACGACGGCGCATGTTTATAGCCCGACGCTGGATACGGCCCGTGGGATCGAGGAACGC 1969 Query 364 GGTC-CGCGCTC-------CGGCTAG------GATGCTGGCGTAATGGTTGTAAGCGGCC 409 ||| | |||| || | || |||||||||||||||| | || Sbjct 1968 AGTCTCTCGCTTACACAATCGTCGAGACTTTGGATGCTGGCGTAATGGCGACGTGACACC 1909 Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCG 469 ||||||| |||||||||||||||||||| | | ||||||| |||||||| |||||||| Sbjct 1908 CGTCTTGAAACACGGACCAAGGAGTCTAGGACATGTGCGAGTCTTTGGGTGGCAAACCCG 1849 Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529 || ||| |||||||||||| |||||||||| || | || ||||||||||||||||| Sbjct 1848 TGGGCGCAATGAAAGTGAATGGAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCCG 1791 Query 530 GATGTCTT-CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAAC 588 || | || |||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1790 GAAGAATTTCGGAAGGATTTGAGTAAGAGCACGTGCCCTGGGACCCGAAAGATGGTGAAC 1731 Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || Sbjct 1730 TATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACG 1671 Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||||||| Sbjct 1670 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1636 >seq118 Length=767018 Score = 468 bits (518), Expect = 2e-129 Identities = 527/695 (76%), Gaps = 39/695 (6%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 650684 TGTGATGCGGCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAATGGGTGGTAAAT 650743 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | |||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 650744 TCCATCTAAAGCTAAATATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 650803 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||| | | ||| |||||| || | |||||||||| ||||| || Sbjct 650804 TGAAAAGCACTTCGTTAGGAGGGTTAAACAGTATGTGAAATTGTCAGCGCGGAAGG--TT 650861 Query 203 GCAAC--CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCC-GGTGCACT--CTTCT 257 | | ||| | ||| | ||| || || | || |||| | | || || Sbjct 650862 ACGTCGTCAGTCATGCTTTGTGGGATTCAGCCTCGCCTTGTGCTTGGTGTATTTCCTGCT 650921 Query 258 GCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTG--GCCCCC 315 |||| |||| ||||||| | | || ||||||| ||| |||||||||| || | Sbjct 650922 GCGG-CAGGTCAGCATCGATTTTGTGGGCCGGATAAGGGCGTCGGGAATGTGATGCACGT 650980 Query 316 TT-----CGGGGGGTGTT-ATAGCCCGGGGTGGAATGCGGCCCG------CCTGGACTGA 363 || ||| | |||| |||||||| | | || ||||||| | ||| | Sbjct 650981 TTTACGACGGCGCATGTTTATAGCCCGACGCTGGATACGGCCCGTGGGATCGAGGAACGC 651040 Query 364 GGTC-CGCGCTC-------CGGCTAG------GATGCTGGCGTAATGGTTGTAAGCGGCC 409 ||| | |||| || | || |||||||||||||||| | || Sbjct 651041 AGTCTCTCGCTTACACAATCGTCGAGACTTTGGATGCTGGCGTAATGGCGACGTGACACC 651100 Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCG 469 ||||||| |||||||||||||||||||| | | ||||||| |||||||| |||||||| Sbjct 651101 CGTCTTGAAACACGGACCAAGGAGTCTAGGACATGTGCGAGTCTTTGGGTGGCAAACCCG 651160 Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529 || ||| |||||||||||| |||||||||| || | || ||||||||||||||||| Sbjct 651161 TGGGCGCAATGAAAGTGAATGGAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCCG 651218 Query 530 GATGTCTT-CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAAC 588 || | || |||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 651219 GAAGAATTTCGGAAGGATTTGAGTAAGAGCACGTGCCCTGGGACCCGAAAGATGGTGAAC 651278 Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || Sbjct 651279 TATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACG 651338 Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||||||| Sbjct 651339 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 651373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989596750