Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq355 480 1e-133 seq252 480 1e-133 seq118 480 1e-133 seq268 118 2e-24 >seq355 Length=869 Score = 480 bits (532), Expect = 1e-133 Identities = 285/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||| ||| | | || || ||||||||||||||||||||||||||| Sbjct 411 TACTAAGTCGAATTACCGTTGCGACAACCCTCCATCAGTAGGGTAAAACTAACCTGTCTC 470 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 530 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 531 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 590 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 591 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 650 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 TCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 706 >seq252 Length=544549 Score = 480 bits (532), Expect = 1e-133 Identities = 285/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||| ||| | | || || ||||||||||||||||||||||||||| Sbjct 56873 TACTAAGTCGAATTACCGTTGCGACAACCCTCCATCAGTAGGGTAAAACTAACCTGTCTC 56814 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56813 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 56754 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56753 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 56694 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56693 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 56634 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56633 TCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 56578 >seq118 Length=767018 Score = 480 bits (532), Expect = 1e-133 Identities = 285/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||| ||| | | || || ||||||||||||||||||||||||||| Sbjct 653468 TACTAAGTCGAATTACCGTTGCGACAACCCTCCATCAGTAGGGTAAAACTAACCTGTCTC 653409 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653408 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 653349 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653348 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 653289 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653288 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 653229 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653228 TCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 653173 Score = 480 bits (532), Expect = 1e-133 Identities = 285/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||| ||| | | || || ||||||||||||||||||||||||||| Sbjct 701149 TACTAAGTCGAATTACCGTTGCGACAACCCTCCATCAGTAGGGTAAAACTAACCTGTCTC 701090 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 701089 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 701030 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 701029 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 700970 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 700969 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 700910 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 700909 TCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 700854 >seq268 Length=3406 Score = 118 bits (130), Expect = 2e-24 Identities = 85/97 (88%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| ||| | || || ||||||||||||||||||||||||||| Sbjct 144 TACTAAGTTGAATTACTATTACGATAACACTCCATCAGTAGGGTAAAACTAACCTGTCTC 203 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 | ||||||||||||||||||||||||||||||||||| Sbjct 204 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395856160