Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq252 80.6 2e-13 seq206 80.6 2e-13 seq118 80.6 2e-13 seq51 80.6 2e-13 >seq252 Length=544549 Score = 80.6 bits (88), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||| | |||| || |||||||| | | | ||||||||| ||||| ||||| |||| Sbjct 592 GCCAGTCCCGA--GTGCTCACTAACTGACCT-AGTCGGTAGTA-GCGACAGGCGGTGTGT 647 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||| ||||||||||| Sbjct 648 ACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 678 Score = 80.6 bits (88), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||| | |||| || |||||||| | | | ||||||||| ||||| ||||| |||| Sbjct 53219 GCCAGTCCCGA--GTGCTCACTAACTGACCT-AGTCGGTAGTA-GCGACAGGCGGTGTGT 53164 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||| ||||||||||| Sbjct 53163 ACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 53133 >seq206 Length=298136 Score = 80.6 bits (88), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||| | |||| || |||||||| | | | ||||||||| ||||| ||||| |||| Sbjct 62413 GCCAGTCCCGA--GTGCTCACTAACTGACCT-AGTCGGTAGTA-GCGACAGGCGGTGTGT 62358 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||| ||||||||||| Sbjct 62357 ACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 62327 >seq118 Length=767018 Score = 80.6 bits (88), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||| | |||| || |||||||| | | | ||||||||| ||||| ||||| |||| Sbjct 649819 GCCAGTCCCGA--GTGCTCACTAACTGACCT-AGTCGGTAGTA-GCGACAGGCGGTGTGT 649764 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||| ||||||||||| Sbjct 649763 ACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 649733 >seq51 Length=1438 Score = 80.6 bits (88), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||| | |||| || |||||||| | | | ||||||||| ||||| ||||| |||| Sbjct 1199 GCCAGTCCCGA--GTGCTCACTAACTGACCT-AGTCGGTAGTA-GCGACAGGCGGTGTGT 1144 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||| ||||||||||| Sbjct 1143 ACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798632300