Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18]
485 sequences; 26,090,089 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq271 232 8e-59
seq252 147 3e-33
seq206 147 3e-33
seq118 147 3e-33
seq51 147 3e-33
>seq271
Length=2488
Score = 232 bits (256), Expect = 8e-59
Identities = 167/192 (87%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 260 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 201
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| || |||||||||||||||||||||||| |||| ||||||||||||||||| ||||
Sbjct 200 GGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCGCA 141
Query 126 CACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| || | |||||| |||||||| |||| | | || ||| | |||||| ||||
Sbjct 140 CAACAAATAAATGCCATACGAGCTCACCAGGAGGAAAGACTCGGTCAGACAGTACACGCC 81
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 80 GTGAGGCGGACC 69
>seq252
Length=544549
Score = 147 bits (162), Expect = 3e-33
Identities = 106/120 (88%), Gaps = 3/120 (3%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1441 CTAGAAACCAACAAAATAGGTCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCC 1500
Query 66 GGCGT--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCC 122
||| | ||||||||||||||||||||||||| ||||||||| || || ||||||| ||
Sbjct 1501 GGCATCATAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAACAGTTCATGGTTCCACC 1560
Score = 147 bits (162), Expect = 3e-33
Identities = 106/120 (88%), Gaps = 3/120 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 52370 CTAGAAACCAACAAAATAGGTCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCC 52311
Query 66 GGCGT--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCC 122
||| | ||||||||||||||||||||||||| ||||||||| || || ||||||| ||
Sbjct 52310 GGCATCATAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAACAGTTCATGGTTCCACC 52251
>seq206
Length=298136
Score = 147 bits (162), Expect = 3e-33
Identities = 106/120 (88%), Gaps = 3/120 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 61564 CTAGAAACCAACAAAATAGGTCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCC 61505
Query 66 GGCGT--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCC 122
||| | ||||||||||||||||||||||||| ||||||||| || || ||||||| ||
Sbjct 61504 GGCATCATAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAACAGTTCATGGTTCCACC 61445
>seq118
Length=767018
Score = 147 bits (162), Expect = 3e-33
Identities = 106/120 (88%), Gaps = 3/120 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 648970 CTAGAAACCAACAAAATAGGTCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCC 648911
Query 66 GGCGT--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCC 122
||| | ||||||||||||||||||||||||| ||||||||| || || ||||||| ||
Sbjct 648910 GGCATCATAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAACAGTTCATGGTTCCACC 648851
>seq51
Length=1438
Score = 147 bits (162), Expect = 3e-33
Identities = 106/120 (88%), Gaps = 3/120 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 350 CTAGAAACCAACAAAATAGGTCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCC 291
Query 66 GGCGT--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCC 122
||| | ||||||||||||||||||||||||| ||||||||| || || ||||||| ||
Sbjct 290 GGCATCATAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAACAGTTCATGGTTCCACC 231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595197203490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |