Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq484 100 1e-18 >seq484 Length=25672 Score = 100 bits (110), Expect = 1e-18 Identities = 148/210 (70%), Gaps = 26/210 (12%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGG---ATGAAGGTGCGGTAACACGCCCT 90 ||||||||||||| |||||||| ||||||||||| || ||| | Sbjct 4328 AGACCCGAAACCAGGTGATCTAACCATGGCCAGGCATATAAAG----------------T 4371 Query 91 GGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGG-GTGAAA 149 || ||||||| | |||||||| | ||||| |||| ||||||||| ||| |||||| Sbjct 4372 GG----CCGAACCTATTAATGTTGCAGAATTATGGGAAGAGCTGTGGTTAGTCAGTGAAA 4427 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCA-- 207 |||||| | ||| ||| |||||||||| || |||| |||| | |||| || || Sbjct 4428 GGCTAATCTAACCTGGTAATAGCTGGTATTCCGTGAAATCTATCTTAGTAGAGCACCAGT 4487 Query 208 AGTATCACCATCGGGGGTAGAGCACTGTTA 237 | || ||| |||| ||| ||||||| || Sbjct 4488 ACTAACACTATCGTATGTACAGCACTGATA 4517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689591805440