Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18]
485 sequences; 26,090,089 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq356 666 0.0
seq252 666 0.0
seq206 666 0.0
seq118 666 0.0
seq181 214 5e-53
>seq356
Length=585
Score = 666 bits (738), Expect = 0.0
Identities = 456/507 (90%), Gaps = 5/507 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || ||| ||| ||| | || ||| |||||||||||||
Sbjct 532 GTACTCATTCCAATTCCAGAACCTTTAAAAAGCTCCAGATTGTTATGTATTGTCACTACC 473
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 413
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 412 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGT 353
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct 352 AGGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGC 293
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
||||||||||||||| | ||||||| |||| ||||||||| | |||||| | |||||
Sbjct 292 GCAAGGCCATGCGATTAGAAAAGTTATCATGATTCACCAAGGGTCGCCGAAGCG-GTTGG 234
Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||| || |||||||||| || | ||||||||||||||
Sbjct 233 -TTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTGATTGCATGTATTAGCTC 175
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||| ||||||| ||||||||||||| ||| || ||||||||||| |||||||||||||
Sbjct 174 TAGATTTACCACAGTTATCCATGTAGCAAGTCACCATCAAATAAACTATAACTGATTTAA 115
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 114 TGAGCCATTCGCAGTTTCACAATATAAGTTGCTTATACTTAGACATGCATGGCTTAATCT 55
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 54 TTGAGACAAGCATATGACTACTGGCAG 28
>seq252
Length=544549
Score = 666 bits (738), Expect = 0.0
Identities = 456/507 (90%), Gaps = 5/507 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || ||| ||| ||| | || ||| |||||||||||||
Sbjct 1776 GTACTCATTCCAATTCCAGAACCTTTAAAAAGCTCCAGATTGTTATGTATTGTCACTACC 1835
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1836 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1895
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1896 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGT 1955
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct 1956 AGGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGC 2015
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
||||||||||||||| | ||||||| |||| ||||||||| | |||||| | |||||
Sbjct 2016 GCAAGGCCATGCGATTAGAAAAGTTATCATGATTCACCAAGGGTCGCCGAAGCG-GTTGG 2074
Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||| || |||||||||| || | ||||||||||||||
Sbjct 2075 -TTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTGATTGCATGTATTAGCTC 2133
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||| ||||||| ||||||||||||| ||| || ||||||||||| |||||||||||||
Sbjct 2134 TAGATTTACCACAGTTATCCATGTAGCAAGTCACCATCAAATAAACTATAACTGATTTAA 2193
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 2194 TGAGCCATTCGCAGTTTCACAATATAAGTTGCTTATACTTAGACATGCATGGCTTAATCT 2253
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 2254 TTGAGACAAGCATATGACTACTGGCAG 2280
Score = 666 bits (738), Expect = 0.0
Identities = 456/507 (90%), Gaps = 5/507 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || ||| ||| ||| | || ||| |||||||||||||
Sbjct 52035 GTACTCATTCCAATTCCAGAACCTTTAAAAAGCTCCAGATTGTTATGTATTGTCACTACC 51976
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 51975 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 51916
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 51915 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGT 51856
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct 51855 AGGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGC 51796
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
||||||||||||||| | ||||||| |||| ||||||||| | |||||| | |||||
Sbjct 51795 GCAAGGCCATGCGATTAGAAAAGTTATCATGATTCACCAAGGGTCGCCGAAGCG-GTTGG 51737
Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||| || |||||||||| || | ||||||||||||||
Sbjct 51736 -TTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTGATTGCATGTATTAGCTC 51678
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||| ||||||| ||||||||||||| ||| || ||||||||||| |||||||||||||
Sbjct 51677 TAGATTTACCACAGTTATCCATGTAGCAAGTCACCATCAAATAAACTATAACTGATTTAA 51618
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 51617 TGAGCCATTCGCAGTTTCACAATATAAGTTGCTTATACTTAGACATGCATGGCTTAATCT 51558
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 51557 TTGAGACAAGCATATGACTACTGGCAG 51531
>seq206
Length=298136
Score = 666 bits (738), Expect = 0.0
Identities = 456/507 (90%), Gaps = 5/507 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || ||| ||| ||| | || ||| |||||||||||||
Sbjct 61229 GTACTCATTCCAATTCCAGAACCTTTAAAAAGCTCCAGATTGTTATGTATTGTCACTACC 61170
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61169 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 61110
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 61109 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGT 61050
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct 61049 AGGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGC 60990
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
||||||||||||||| | ||||||| |||| ||||||||| | |||||| | |||||
Sbjct 60989 GCAAGGCCATGCGATTAGAAAAGTTATCATGATTCACCAAGGGTCGCCGAAGCG-GTTGG 60931
Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||| || |||||||||| || | ||||||||||||||
Sbjct 60930 -TTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTGATTGCATGTATTAGCTC 60872
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||| ||||||| ||||||||||||| ||| || ||||||||||| |||||||||||||
Sbjct 60871 TAGATTTACCACAGTTATCCATGTAGCAAGTCACCATCAAATAAACTATAACTGATTTAA 60812
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 60811 TGAGCCATTCGCAGTTTCACAATATAAGTTGCTTATACTTAGACATGCATGGCTTAATCT 60752
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 60751 TTGAGACAAGCATATGACTACTGGCAG 60725
>seq118
Length=767018
Score = 666 bits (738), Expect = 0.0
Identities = 456/507 (90%), Gaps = 5/507 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || ||| ||| ||| | || ||| |||||||||||||
Sbjct 648635 GTACTCATTCCAATTCCAGAACCTTTAAAAAGCTCCAGATTGTTATGTATTGTCACTACC 648576
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648575 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 648516
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 648515 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGT 648456
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct 648455 AGGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGC 648396
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
||||||||||||||| | ||||||| |||| ||||||||| | |||||| | |||||
Sbjct 648395 GCAAGGCCATGCGATTAGAAAAGTTATCATGATTCACCAAGGGTCGCCGAAGCG-GTTGG 648337
Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||| || |||||||||| || | ||||||||||||||
Sbjct 648336 -TTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTGATTGCATGTATTAGCTC 648278
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||| ||||||| ||||||||||||| ||| || ||||||||||| |||||||||||||
Sbjct 648277 TAGATTTACCACAGTTATCCATGTAGCAAGTCACCATCAAATAAACTATAACTGATTTAA 648218
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 648217 TGAGCCATTCGCAGTTTCACAATATAAGTTGCTTATACTTAGACATGCATGGCTTAATCT 648158
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 648157 TTGAGACAAGCATATGACTACTGGCAG 648131
>seq181
Length=534767
Score = 214 bits (236), Expect = 5e-53
Identities = 138/151 (91%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 50 TGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATG 109
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 38026 TGTCACTACCTCCCCGTGTTGGGATTGGGTAATTTGCGCACCTGCTGCCTTCCTTGGATG 38085
Query 110 TGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTG 169
|||||||||||| ||||||||||||||| | ||| |||| | ||||||| |||||||| |
Sbjct 38086 TGGTAGCCGTTTTTCAGGCTCCCTCTCCAGGATCAAACCTTTATTCCCCCTTACCCGTCG 38145
Query 170 ATACCATGGTAGGCCACTATCCTACCATCGA 200
||||||||||||| |||||||||||||||
Sbjct 38146 CAACCATGGTAGGCCTCTATCCTACCATCGA 38176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392674560
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