Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq19557 102 2e-19 seq108311 73.4 8e-11 >seq19557 Length=116 Score = 102 bits (112), Expect = 2e-19 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 252 ACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCG 311 |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 2 ACCTTAGGCCCCGACTAACCCTGATCCGATTAGCGTTGATCAGGAAACCTTAGTCTTTCG 61 Query 312 GCGAGGGGGTTTCCCACCC 330 | | | ||||||| | ||| Sbjct 62 GTGGGCGGGTTTCTCTCCC 80 >seq108311 Length=563 Score = 73.4 bits (80), Expect = 8e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 253 CCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGG 312 ||||| | |||||| |||||| |||||| | || ||| ||||||||||| | ||| ||| Sbjct 115 CCTTAGGGGCCGACTCACCCTGCTCCGATGAACGTTGAACAGGAAACCTTGGGCTTACGG 56 Query 313 CGAGGGGGTTTCCCACCCCC 332 || ||||| || ||||||| Sbjct 55 CGTGGGGGCTTTTCACCCCC 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 958932470400