Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq134 187 5e-45 seq87782 129 1e-27 seq76551 127 4e-27 seq50808 118 2e-24 seq35313 75.2 2e-11 >seq134 Length=167 Score = 187 bits (206), Expect = 5e-45 Identities = 129/146 (88%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||||||||||||||||||||||||| | |||||||||| || ||||| || ||| Sbjct 162 TAGACGCGAAACCTTGTGATCTACCCATGGACAGGTTGAAGGTGCCGTAACAGGTACTGG 103 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||| Sbjct 102 AGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGATCTGTGGGTAGGGGTGAAAGGC 43 Query 311 CAATCAAACTGGGAAATAGCTCGTAC 336 ||||||||||||||||||||||||| Sbjct 42 TAATCAAACTGGGAAATAGCTCGTAC 17 >seq87782 Length=221 Score = 129 bits (142), Expect = 1e-27 Identities = 164/222 (74%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||||||||| ||||||| |||||| | | |||| ||||| || || ||| || ||||| Sbjct 221 GTGACGGCGTACCTTTTGTATAATGGGTCAACGACTTAGT-GTAACAAGCAAGCTTAAG- 164 Query 131 GCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGC 188 | || || ||| ||||| ||||||||| || || ||||||| |||| || || Sbjct 163 ----CCGGTAGGTGTAGGCGAAGCGAAAGCGAGTCTGAATAGGGCGATATAGTTTGTTGC 108 Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248 ||||| ||||||| |||||||| ||| ||||||||||||| |||||| | | Sbjct 107 ATTAGACCCGAAACCGAGTGATCTAGCCATGAGCAGGTTGAAGGTTGGGTAACACCAACT 48 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACT 290 ||||||||||||| | | |||| || || |||||||| Sbjct 47 GGAGGACCGAACCCGCATCTGTTGCAATAGATTGGGATGACT 6 >seq76551 Length=278 Score = 127 bits (140), Expect = 4e-27 Identities = 100/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 215 CCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAA 274 ||| ||||||||||||| |||||| | | ||||||||||||||||| || |||||| Sbjct 278 CCATGAGCAGGTTGAAGGTAAGGTAACACTTACTGGAGGACCGAACCGGTGAATGTTGAA 219 Query 275 AAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || || |||||||||| | || ||||||||||||||||||||||| ||| |||||| || Sbjct 218 AAATTCTCGGATGACTTGTGGATAGGGGTGAAAGGCCAATCAAACCTGGACATAGCTGGT 159 >seq50808 Length=160 Score = 118 bits (130), Expect = 2e-24 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 161 AGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGA 220 || || ||||||||| |||| || | |||| ||||||| |||||||| ||| | Sbjct 1 AGTCTGAACAGGGCGTTCAGTTCGTCGGATCAGACCCGAAACCGAGTGATCTAGCCATGG 60 Query 221 GCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTT 280 |||||||||| |||||||| || ||||||||||||| ||| |||||||| | Sbjct 61 CCAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAACGGGTGCCTGTTGAAAAAGTC 120 Query 281 TCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACT 320 || ||||| | || |||||||||||||||||||||||| Sbjct 121 TCCGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACT 160 >seq35313 Length=104 Score = 75.2 bits (82), Expect = 2e-11 Identities = 72/92 (78%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||||||| |||||| ||| |||||||| | ||||||||| Sbjct 93 CCCGACAAGGGGAGTGAAATAGAACCTGAAACCGGATGCCTACAAACAGTCGGAGCCC-- 36 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATG 95 | ||||||||||| ||||||| |||||| Sbjct 35 -GCAAGGGTGACGGCGTACCTTTTGTATAATG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971718236672