Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq70788 125 3e-26 >seq70788 Length=3013 Score = 125 bits (138), Expect = 3e-26 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 2865 TTGAGTTCGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 2924 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||| | ||||||||| | |||| | ||| ||||||||||| ||| | Sbjct 2925 AGCCGGGGGAAACCCAGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGCACGA 2984 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 2985 TTTGGGTATCGGAGCGA 3001 Score = 100 bits (110), Expect = 1e-18 Identities = 105/136 (77%), Gaps = 3/136 (2%) Strand=Plus/Plus Query 49 TGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAG 108 ||||||||||||||| || || ||||| | ||| | |||| |||||| | || Sbjct 2370 TGTTTGGGAATGCAGTGTCAAGCGGCAGGTATGTGTCTGCCAAAGTTAAATACAGAGTAG 2429 Query 109 --AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGAG 165 ||||||||| || |||||||| |||| |||||| | |||||||||||||||||||||| Sbjct 2430 GAAGACCGATATCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGAG 2489 Query 166 TTAAAAAGCACGTGAA 181 | | | || || |||| Sbjct 2490 TGACATAGAACCTGAA 2505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077614738550