Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq64250 145 7e-33 seq37147 127 2e-27 seq108801 100 3e-19 seq110687 96.9 3e-18 seq90866 96.9 3e-18 seq98757 77.0 3e-12 >seq64250 Length=137 Score = 145 bits (160), Expect = 7e-33 Identities = 95/105 (90%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 11 GGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGAT 70 |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 31 GGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTGTGGGGAT 90 Query 71 TGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 ||| ||| |||||||||| |||| |||||||||||||||||| Sbjct 91 CCGCAAATAGGAATTGATCCACAGATGTCCGAATGGGGCAACCCG 135 >seq37147 Length=122 Score = 127 bits (140), Expect = 2e-27 Identities = 90/103 (87%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 11 GGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGAT 70 |||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||| ||||||| Sbjct 3 GGATGCCTTGGCTCTCAGAGGCGATGAAAGACGTGATAAGCTGCGATAAGCTTCGGGGAT 62 Query 71 TGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACC 113 | ||| ||| ||||||||||| |||| || |||||||| |||| Sbjct 63 TAGCAAATATGAATTGATCCGAAGATTTCTGAATGGGGAAACC 105 >seq108801 Length=1840 Score = 100 bits (110), Expect = 3e-19 Identities = 131/180 (73%), Gaps = 10/180 (6%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| ||| || ||||||| |||||||||| || ||||||| ||| Sbjct 1489 GGCATTCGGTGGATGCCTTGGCGCTAAGAGGCGATGAAGGACGTGGTACGCTGCGATAAG 1548 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 | ||||| || | | | ||||||||| || ||||||||||||||||| Sbjct 1549 ACATGGGGAGCCGCGAACAGGCTTTGATCCGTGTATCTCCGAATGGGGCAACCC----AC 1604 Query 121 TTGGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | | |||| ||| ||| | |||||| ||||||||||||||||||||||| Sbjct 1605 CCGCAAGGGTATC---CCGCAAGG---GAAGCGAACCTGGGGAACTGAAACATCTAAGTA 1658 >seq110687 Length=877 Score = 96.9 bits (106), Expect = 3e-18 Identities = 87/108 (81%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| |||| Sbjct 706 GGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 765 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || ||||| || | |||||||| |||| ||||||||||| ||||| Sbjct 766 GAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC 813 >seq90866 Length=150 Score = 96.9 bits (106), Expect = 3e-18 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||||||| ||| |||||| |||||||||| ||||||||| ||||| || Sbjct 108 ACGGTGGATGCCTTGGCAGAATCAGGCGATGAAGGACGTGGCAAGCTGCGATAAGCTTCG 49 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACC 113 |||| ||||| | | |||||||| |||| ||||||||||| |||| Sbjct 48 GGGAGCCGCACACAGGCGTTGATCCGGAGATTTCCGAATGGGGAAACC 1 >seq98757 Length=104 Score = 77.0 bits (84), Expect = 3e-12 Identities = 80/104 (77%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 11 GGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGAT 70 |||||||| ||| | |||||| ||||||||| || ||||| ||||| |||||| Sbjct 1 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 60 Query 71 TG-GCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACC 113 | ||| | ||| |||||||| |||| ||||||||||| |||| Sbjct 61 CGAGCAAACACGCTTTGATCCGCAGATTTCCGAATGGGGAAACC 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476286362581