Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq81389 138 1e-30 seq65667 84.2 2e-14 seq108311 78.8 1e-12 seq107418 78.8 1e-12 >seq81389 Length=274 Score = 138 bits (152), Expect = 1e-30 Identities = 138/175 (79%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||||| | || || |||||| ||| |||||||||| || || Sbjct 212 CGTAAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGCTCGAGTGAATCATGGCTA 153 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| |||||| || |||||||||||||||| ||||| | || || ||| | Sbjct 152 AGGAACTCGGCAAAATGGCCCTGTAACTTCGGGA-GAAGGGGCGCT-GATAGCAATATCA 95 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||| ||| |||||| ||||||||||||||||||| |||| ||| || Sbjct 94 -GCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACATGGCTATGCAAA 41 >seq65667 Length=119 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/102 (80%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| |||| || | |||||| | |||||||| ||||||| |||||| Sbjct 16 CAAACCGACACAGGTAGACGAGGAGAATATCCAAAGGCGCTCGAGTGAAAGCTTGTTAAG 75 Query 84 GAACTAGGCAAACT-GACCCTGTAACTTCGGGATAAAGGGTC 124 ||||| |||||| | ||||| |||||||||||| ||||||| Sbjct 76 GAACTCGGCAAATTAGACCC-GTAACTTCGGGA-GAAGGGTC 115 >seq108311 Length=563 Score = 78.8 bits (86), Expect = 1e-12 Identities = 78/100 (78%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || | || | ||| ||| |||||||||||||| ||| || | Sbjct 359 CGCAAACCGACACAGGTGGGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCGGGAGA 418 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG 121 ||||||| |||||| || | |||||||||||| ||||| Sbjct 419 AGGAACTCGGCAAATTGGTACCGTAACTTCGGGA-AAAGG 457 >seq107418 Length=414 Score = 78.8 bits (86), Expect = 1e-12 Identities = 83/107 (78%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| ||||| || || | ||| ||| |||||||||||||| ||| ||| || Sbjct 187 CGCAAACCGACACTGGTGCGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCA-GGAG 129 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT 127 |||||||| |||||| |||| | |||||||||| | || | || ||| Sbjct 128 AAGGAACTCGGCAAATTGACACCGTAACTTCGGAAGAAGGTGTGCCT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530627759654