Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq8960 84.2 2e-14 seq108311 77.0 3e-12 seq30508 73.4 4e-11 >seq8960 Length=117 Score = 84.2 bits (92), Expect = 2e-14 Identities = 74/92 (80%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA----AAGTGGACGTATAGGGT 123 ||||||||||| |||||||||| |||||| || || ||| ||||||||||| Sbjct 96 GCGACTGTTTAGCAAAAACACAGGGCTCTGCTAAGTCGGCTTCAAGACGACGTATAGGGC 37 Query 124 GTGACGCCTGCCCGGTGCCGGAAGGTTAATTG 155 |||||||||||||||||| ||||||||| || Sbjct 36 CTGACGCCTGCCCGGTGCCTGAAGGTTAAGTG 5 >seq108311 Length=563 Score = 77.0 bits (84), Expect = 3e-12 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAG 109 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 519 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAG 563 >seq30508 Length=146 Score = 73.4 bits (80), Expect = 4e-11 Identities = 63/76 (83%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAA--CACGAAAGTGGACGTATAGGGTGT 125 || |||||||| |||||||||| |||||| || || ||| || ||||||||||| | Sbjct 75 GCAACTGTTTAACAAAAACACAGGGCTCTGCGAAATCATGAAGATG-ACGTATAGGGTCT 17 Query 126 GACGCCTGCCCGGTGC 141 |||||||||||||||| Sbjct 16 GACGCCTGCCCGGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476286362581