Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq84045 129 1e-27 seq108311 125 2e-26 seq107418 105 2e-20 seq5797 100 7e-19 seq77325 95.1 3e-17 seq51506 86.0 2e-14 seq8960 84.2 6e-14 seq32446 77.0 8e-12 seq21509 77.0 8e-12 seq30508 73.4 1e-10 >seq84045 Length=138 Score = 129 bits (142), Expect = 1e-27 Identities = 113/138 (82%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 257 CTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTAC-GG 315 |||||||||||||||||||||||||| |||||| ||| || || || |||| || Sbjct 138 CTGTGTTTTTAATAAACAGTCGCAGCCACCTGGTCTCTGCGGCCCTCAGTCGCTTCTTGG 79 Query 316 AGCAAGTCCT-TCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374 ||||||||| | || || |||| ||||||||||||||||||||| || |||||||| Sbjct 78 AGCAAGTCCAATAACAACCAAGGGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCT 19 Query 375 AGTTCCTTCCCCCGAGTT 392 ||||||||| |||||||| Sbjct 18 AGTTCCTTCACCCGAGTT 1 >seq108311 Length=563 Score = 125 bits (138), Expect = 2e-26 Identities = 137/180 (76%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 238 CTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCG 297 |||||||||||||||||||||||||||||| |||||||||||||| || | | | | Sbjct 563 CTTTCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCA 504 Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGC--ACCTTCTCCCGAAG 355 ||| | || | || || || || ||||| || ||||| |||||||| Sbjct 503 ACCCTTTCGCCCTATCACAGTAAAGTGACCAAGCT-ACCGGGGCGTACCTTTTCCCGAAG 445 Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 ||||||| || |||||| ||||||||| |||||||||||||||||||||| | || ||| Sbjct 444 TTACGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 385 >seq107418 Length=414 Score = 105 bits (116), Expect = 2e-20 Identities = 124/164 (76%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 257 CTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCT---TAC 313 |||||||||||||||||||||||||| || | | | | ||| || ||| | | Sbjct 1 CTGTGTTTTTAATAAACAGTCGCAGCCACCGATTTTTTGCAACCCCGTTGGGCTCCATCC 60 Query 314 G-GAGCAAGTCCTTCACCCTC-ACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTG 371 | ||| | ||||||| | | ||| |||||||| |||||||||||||| | |||| Sbjct 61 GCGAGGGA---CTTCACCTACTAAAGGCACACCTTCTTCCGAAGTTACGGTGTCAATTTG 117 Query 372 CCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 || ||||||||| || ||||||||||||||||||| | || ||| Sbjct 118 CCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTC 161 >seq5797 Length=120 Score = 100 bits (110), Expect = 7e-19 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| || ||||||||||||||| ||| | ||||||||||| | || || Sbjct 33 GCATCTTCACGAGGAATTCAATTTCACTGAGCCTCTGCTGGAGACAGCGGGGAAGTCATT 92 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACC 100 |||||||||||||||||||||||||||| Sbjct 93 ACGCCATTCGTGCAGGTCGGAACTTACC 120 >seq77325 Length=102 Score = 95.1 bits (104), Expect = 3e-17 Identities = 91/113 (81%), Gaps = 13/113 (12%) Strand=Plus/Plus Query 124 GGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC 182 |||||||||| ||||||||||||||||||| ||||||| || ||||| | | || Sbjct 1 GGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTC-------AG-TTCGCTGCTTGC 52 Query 183 T-AACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGT 234 ||| || | ||||||||| |||||||||||||||||| ||||||||||| Sbjct 53 ACAACTCCCT---TTAACCTTCAGGCACCGGGCAGGCGTCAGACCCTATACGT 102 >seq51506 Length=156 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || | || ||||||| | | ||||||||| ||| ||| || |||||||| Sbjct 103 GCGGGTAACCGGCGTCTTCACCGATACCACAATTTCACCGAG-CTCATGGCTGAGACAGC 45 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGAC 104 ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 44 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGAC 1 >seq8960 Length=117 Score = 84.2 bits (92), Expect = 6e-14 Identities = 74/92 (80%), Gaps = 4/92 (4%) Strand=Plus/Plus Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT----TCGTGTT 247 || ||||||||| |||||||||||||||||| ||||||||||| ||| || || Sbjct 5 CACTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACTT 64 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||||| |||||||||| ||||||||||| Sbjct 65 AGCAGAGCCCTGTGTTTTTGCTAAACAGTCGC 96 >seq32446 Length=174 Score = 77.0 bits (84), Expect = 8e-12 Identities = 81/104 (78%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || | |||||||||| | | | ||||||||| | | |||| || ||||||||| Sbjct 72 GCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCGGG-CTCGTGGAGGAGACAGC 130 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGAC 104 | || ||| ||||||||||||||||||||||||||||| Sbjct 131 GTTCAACTCATTAGACCATTCGTGCAGGTCGGAACTTACCCGAC 174 >seq21509 Length=111 Score = 77.0 bits (84), Expect = 8e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 |||||| |||||| ||||| | | |||||| ||||||||| | |||||||||||| Sbjct 78 CCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCG 19 Query 403 CCTTGGTATTCTCTACC 419 ||||||||| ||||||| Sbjct 18 CCTTGGTATACTCTACC 2 >seq30508 Length=146 Score = 73.4 bits (80), Expect = 1e-10 Identities = 63/76 (83%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 206 GCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG--TTTGCAGAGTGCTGTGTT 263 ||||||||||||||||| ||||||||||| || ||| || || |||||| ||||||| Sbjct 1 GCACCGGGCAGGCGTCAGACCCTATACGT-CATCTTCATGATTTCGCAGAGCCCTGTGTT 59 Query 264 TTTAATAAACAGTCGC 279 ||| |||||||| || Sbjct 60 TTTGTTAAACAGTTGC 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1259397977792