Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq81389 138 2e-30 seq8960 113 1e-22 seq77325 105 1e-20 seq51506 105 1e-20 seq32446 82.4 2e-13 seq5797 78.8 2e-12 seq30508 73.4 8e-11 >seq81389 Length=274 Score = 138 bits (152), Expect = 2e-30 Identities = 125/155 (81%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 |||||||||||| ||||| | ||||| || |||| ||| || ||| | | |||||||| Sbjct 1 GCACCGGGCAGGTGTCAGGCCATATACGTCATCTTTCGATTTTGCATAGCCATGTGTTTT 60 Query 260 TGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG--ACAGGCACCCCTTCT 317 || ||||||||||| ||||||| ||| |||||| ||| || | | || |||||||| Sbjct 61 TGTTAAACAGTCGCCTGGGCCTTTTCACTGCGG-CTGATATTGCTATCAGCGCCCCTTCT 119 Query 318 CCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||| ||||||| ||| ||||||||||||||||||| Sbjct 120 CCCGAAGTTACAGGGCCATTTTGCCGAGTTCCTTA 154 >seq8960 Length=117 Score = 113 bits (124), Expect = 1e-22 Identities = 82/95 (86%), Gaps = 4/95 (4%) Strand=Plus/Plus Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG----CGAC 239 ||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||| Sbjct 3 TCCACTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGAC 62 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 |||||||| |||||||||||| |||||||||||| Sbjct 63 TTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCT 97 >seq77325 Length=102 Score = 105 bits (116), Expect = 1e-20 Identities = 89/109 (82%), Gaps = 9/109 (8%) Strand=Plus/Plus Query 118 GGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCT 177 ||||||||||||||||||||||||||||| |||||| ||||| |||| |||| Sbjct 1 GGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAGTTCGCTGC-----TTGC--- 52 Query 178 AACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATAC 226 ||| |||| ||||||||| |||||||||||||||||| ||||||| Sbjct 53 -ACAACTCCCTTTAACCTTCAGGCACCGGGCAGGCGTCAGACCCTATAC 100 >seq51506 Length=156 Score = 105 bits (116), Expect = 1e-20 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || ||||| ||||||||| | |||||||||||||| || | |||||||| ||||| Sbjct 98 TAACCGGCGTCTTCACCGATACCACAATTTCACCGAGCTCATGGCTGAGACAGCGCCCAG 39 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGAC 98 |||||||| || ||||||| |||||||||||||||||| Sbjct 38 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGAC 1 >seq32446 Length=174 Score = 82.4 bits (90), Expect = 2e-13 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || ||||||||||||||| | ||||||||||||| | | | ||||||| | ||| Sbjct 77 TAACCGGCATCTTCACCGATACTACAATTTCACCGGGCTCGTGGAGGAGACAGCGTTCAA 136 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGAC 98 || ||| || ||||||| |||||||||||||||||| Sbjct 137 CTCATTAGACCATTCGTGCAGGTCGGAACTTACCCGAC 174 >seq5797 Length=120 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/88 (80%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| ||| | ||||||||| ||| || | | ||||||| | || || || Sbjct 33 GCATCTTCACGAGGAATTCAATTTCACTGAGCCTCTGCTGGAGACAGCGGGGAAGTCATT 92 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACC 94 ||||| ||||||| |||||||||||||| Sbjct 93 ACGCCATTCGTGCAGGTCGGAACTTACC 120 >seq30508 Length=146 Score = 73.4 bits (80), Expect = 8e-11 Identities = 62/75 (83%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT-GCGACTTAGCAGAAACCTGTGTTT 258 |||||||||||||||||| ||||||| || |||| || || ||||| ||||||||| Sbjct 1 GCACCGGGCAGGCGTCAGACCCTATACGTCATCTTCATGATTTCGCAGAGCCCTGTGTTT 60 Query 259 TTGGTAAACAGTCGC 273 ||| |||||||| || Sbjct 61 TTGTTAAACAGTTGC 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061218600576