Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9530 113 7e-23 seq70788 98.7 2e-18 >seq9530 Length=117 Score = 113 bits (124), Expect = 7e-23 Identities = 92/111 (83%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 88 GCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG--CCACCAACCATAGTCGATGGGGCTAT 145 ||| || || | ||||||||||||||| | | |||| || || || | | |||| Sbjct 111 GCTAGATGCTGACAGTCCCTCTAAGAAGTCGATACAACCAGCCCAAGCCGGTCTGACTAT 52 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 196 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 1 >seq70788 Length=3013 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 1015 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 956 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 955 CCACCATTCAAGGGATCGAGAAAGAACACTCAATCTGTC 917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795941639481