Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq62492 96.9 7e-18 seq49256 95.1 2e-17 >seq62492 Length=152 Score = 96.9 bits (106), Expect = 7e-18 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189 ||||||||||||| |||||||||| |||||||| ||||||| ||||| | | ||||| Sbjct 3 AGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTATCGGAGGCTTTCAAAGGTCCGCTCAGT 62 Query 190 TTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCA 249 | ||| |||| |||| || |||| ||| ||| | | ||||||| || || | Sbjct 63 CCGCTTGGTAACCGGACGCAGAGCGCAATAGCAGAAGCGGGCTTGACTGTGAGGCCGACT 122 Query 250 AGTCTAGCAGGGACGAAAGTCGG 272 || | ||||||| |||||| ||| Sbjct 123 AGCCGAGCAGGGTCGAAAGACGG 145 >seq49256 Length=165 Score = 95.1 bits (104), Expect = 2e-17 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 248 CAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307 |||||| ||||| |||||||||||| | || |||||||| ||| ||| ||||| |||| Sbjct 160 CAAGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCTGCGTGGAAGGGCCA 101 Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| ||| ||||||| ||| || |||||| Sbjct 100 TCGCTCAACGAATAAAAGGTACTCTAGGGATA 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981307561376