Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq51506 136 4e-30 seq32446 129 6e-28 >seq51506 Length=156 Score = 136 bits (150), Expect = 4e-30 Identities = 101/122 (83%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||||| | |||||||| |||| ||||||||||||| |||||||||| || Sbjct 122 GGGGTCTTTCCGTCCCGTTGCGGGTAACCGGCGTCTTCACCGATACCACAATTTCACCGA 63 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 ||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct 62 GCTCATGGCTGAGACAGCGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCG 3 Query 144 AC 145 || Sbjct 2 AC 1 >seq32446 Length=174 Score = 129 bits (142), Expect = 6e-28 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||| | Sbjct 52 CGGGGTCTTTCCGTCCCGTGGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCG 111 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||| || ||||||| || ||||||||||||||||||||||||||| Sbjct 112 GGCTCGTGGAGGAGACAGCGTTCAACTCATTAGACCATTCGTGCAGGTCGGAACTTACCC 171 Query 143 GAC 145 ||| Sbjct 172 GAC 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546610523499