Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq90033 134 3e-29 seq102320 118 2e-24 seq88709 75.2 2e-11 >seq90033 Length=142 Score = 134 bits (148), Expect = 3e-29 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||| ||||||||||||||||||||||||| |||||||||||| |||||||| | Sbjct 1 TATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGG 60 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||||| | || ||||| |||||||| |||| |||||| |||||||||| Sbjct 61 CCATCCTCTCAGATCCCCTAAACATCGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGC 120 Query 190 TAAT 193 |||| Sbjct 121 TAAT 124 >seq102320 Length=158 Score = 118 bits (130), Expect = 2e-24 Identities = 86/97 (89%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 |||||||||| ||||||||| | || |||||||||| ||||| ||||||||||||||| Sbjct 62 TTTACAATCCTAAGACCTTCAT-CATTCACGCGGCAT-GGCTGCGTCAGGCTTTCGCCCA 119 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 98 ||| ||| |||||||||||||||||||||||||||| Sbjct 120 TTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGT 156 >seq88709 Length=101 Score = 75.2 bits (82), Expect = 2e-11 Identities = 77/101 (76%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 232 CCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCC 291 |||| ||||| || ||| |||||||||||||||||| |||| ||||||||||| Sbjct 101 CCCCCACTTTCATCCTTAGATCGTATGCGGTATTAGCGTAACTTTCGCTACGTTATCCCC 42 Query 292 CACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCC 332 |||| | || | |||| | ||||||||||||| |||| Sbjct 41 CACTCCAGGGTACGTTCCGATATATTACTCACCCGTTCGCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070807925280