Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq109168 116 5e-24 seq107612 107 3e-21 seq111071 102 1e-19 seq103347 102 1e-19 seq76301 98.7 1e-18 seq110986 82.4 1e-13 >seq109168 Length=13482 Score = 116 bits (128), Expect = 5e-24 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| || ||||||||||| || | ||||||||||| || || |||| |||||| ||||| Sbjct 11511 GCCAGGCGCCGGCGCTTCCTCGATCACCTTCTGGTGGCGGCGCTGCATCGAGCAGTCGCG 11452 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 ||||| || || ||||| || |||||| || | || | ||||||||| || Sbjct 11451 TTCGCCGAGCCAGACGGCGTTTTTATGTTCGTCGGCGAGGATCTGGATTTCCACGTGGCG 11392 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGG-TTGCCGAACCAGGCGCCCGCTT 235 ||||| ||||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct 11391 CGGGTTTTCCAGGTACTTCTCCATATAGACC-TCGGGATTGCCGAAGGCCGCGCCCGCTT 11333 Query 236 C 236 | Sbjct 11332 C 11332 >seq107612 Length=7318 Score = 107 bits (118), Expect = 3e-21 Identities = 139/190 (73%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 51 GTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCA 110 ||| | ||| ||||| || ||||| ||||| ||||||||||| || || ||||||||||| Sbjct 2604 GTCGATGCCTGGTGCTGGGGCTTCCTCCAGCACCTTCTGGTGGCGGCGCTGCAGCGAGCA 2545 Query 111 ATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCAC 170 |||||| ||| || | |||||||| |||| || ||| || || | ||||| Sbjct 2544 GTCGCGGCTGCCAAGCCACAGCGCGTGGCCATGGCGATCACACAACACCTGGATCTCCAC 2485 Query 171 GTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAA--CCAGGCG 228 || ||||| | | |||| | || || | |||||| ||||||||||| || |||| Sbjct 2484 ATGGCGTGGATGGCCCAGGAATTTCTCTATATAGACCTCGGGGTTGCCGAAGGCCCGGCG 2425 Query 229 C-CCGCTTCG 237 | || ||||| Sbjct 2424 CGCCTCTTCG 2415 >seq111071 Length=13202 Score = 102 bits (112), Expect = 1e-19 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| || ||||||||||| || | | ||||||||| || || |||| ||||| ||||| Sbjct 8139 GCCGGGGGCCGGCGCTTCCTCGATGATCTTCTGGTGGCGGCGCTGCATGGAGCAGTCGCG 8080 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTG--GCCGTCGGACAGTACTTGCACTTCCACGTGA 174 |||||||| || ||||| | || | ||||| ||| | || | ||||| || Sbjct 8079 CTCGCCCAGCCAGACGGCGT--TCTTGAAGGTGTCGGCCAGGATCTGGATCTCCACATGG 8022 Query 175 CGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCT 234 |||||||| ||| |||| |||| ||||||| ||||||||||| ||| ||||| Sbjct 8021 CGTGGGTTCTCCAGAAACTTCTCCATGTAGACCTCGGGGTTGCCGAAGGCGGCACCCGCC 7962 Query 235 TCGGAGCGAGTC 246 |||| || ||| Sbjct 7961 TCGGCACGCGTC 7950 >seq103347 Length=844 Score = 102 bits (112), Expect = 1e-19 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 || ||||||||||| |||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct 791 GGGGCTTCTTCCAGCACCTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGTTCGCCCAGG 732 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 || ||| ||| |||| ||||| | || || | || | |||||| || || Sbjct 731 TGCGCCACGTTGCCGTGGCTGTCGGCGATGACCTGGATCTCGATGTGACGCGGCTTTTGG 672 Query 187 AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAGCG 242 ||||| |||| |||||| | || ||||||| |||| || |||| ||| Sbjct 671 AGGTAGCGCTCCATATAGACCGTGTCGTCGCCGAACGCCGCGCGGGCCTCGGCGCG 616 >seq76301 Length=315 Score = 98.7 bits (108), Expect = 1e-18 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 49 TCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAG 108 ||||||| ||| || ||||| || || || | |||||||||||||| |||||||||||| Sbjct 206 TCGTCCATGCCGGGGGCCGGAGCCTCCTCGATGACCTTCTGGTGACGGCGTTGCAGCGAG 265 Query 109 CAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCG 150 || ||||| ||| |||||||| | ||| ||| |||| |||| Sbjct 266 CAGTCGCGCTCGAACAGGTGGACGACGTTGCCGTGGCTGTCG 307 >seq110986 Length=36495 Score = 82.4 bits (90), Expect = 1e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113 || |||||| ||||| ||||||||||| ||||||||||| || ||||||| ||||| || Sbjct 263 CATGCCCGGCGCCGGGGCTTCTTCCAGCACCTTCTGGTGGCGGCGTTGCACGGAGCAGTC 204 Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTG 143 ||| ||| ||||| || || |||||| Sbjct 203 GCGCTCGAACAGGTAGACACAGTCGCCCTG 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735207136870