Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq31534 282 2e-73 >seq31534 Length=2413 Score = 282 bits (312), Expect = 2e-73 Identities = 364/501 (73%), Gaps = 6/501 (1%) Strand=Plus/Minus Query 106 CTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTC 165 ||||||||||| || ||| | || | ||| | |||||||| || |||||| ||||| Sbjct 2371 CTTGGCGTTGTTCGCCAGTTGCTGGTTGCGCGCCTGGGTCGATGCGAACATGTAGTCGTC 2312 Query 166 GTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACAC 225 |||||| || ||| | | |||||| ||||||||||| || |||| |||||| || || Sbjct 2311 GTAGTTACCAGGGTAGATACGCAGCGTGCCGTAGTCCATATCGGCCACGTGGGTGCAGAC 2252 Query 226 GCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAA---CGCTGGGT 282 |||||||||||| || ||||| |||||||||| |||| | ||| |||| | | Sbjct 2251 CTGGTTCAGGAAGTGGCGATCGTGCGAGATGATGACCATCG---TCGAATTGCGCTCGTT 2195 Query 283 CAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAG 342 || | || ||| |||||||| || ||||||||||| | || ||||||||||||||||| Sbjct 2194 GAGCACATCTTCGAGCCAGCGAATCGTGTTGATGTCGAGGTTATTGGTCGGTTCGTCGAG 2135 Query 343 CAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCC 402 || ||| | || || | || ||||||||||| ||||||| || |||||||||||||| Sbjct 2134 CAGCAGGATGTCCGGGTTCGAGAACAGCGCCTGCGCCAGCAGCACGCGCAGCTTCCAGCC 2075 Query 403 CGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAG 462 ||| | ||| |||||| || || |||||| || | || | || || ||||| Sbjct 2074 CGGCGCCACACTGCTCATTGGGCCCTGGTGCTGTTCGATCGACACGCCGGCGCCGAGCAG 2015 Query 463 CAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAG 522 || ||| || || || | ||||| | |||||||| |||||| | | | ||||||| Sbjct 2014 CAACTCGCCCGCGCGCGCCTCGGCCGAATAGCCGTCGTACTCGGCTACTTTGCTTTCCAG 1955 Query 523 CTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACG 582 || || || |||| ||| || ||| || ||| || || ||| || | ||||| Sbjct 1954 TTCAGCGGCGTGCATGTAGTCGTCGTCGGTCGCTTCGGGGTTCGCGTAGATCGCGTCACG 1895 Query 583 CTCGGCCTTGACCTTCCACAG 603 ||||| || | |||||||| Sbjct 1894 CTCGGAGATGGCGTTCCACAG 1874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1879442255796