Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq15711 152 2e-34 seq76551 143 1e-31 seq87782 120 1e-24 seq134 114 5e-23 seq79188 105 2e-20 seq50808 96.9 1e-17 seq52838 91.5 5e-16 seq55197 86.0 2e-14 >seq15711 Length=102 Score = 152 bits (168), Expect = 2e-34 Identities = 95/102 (93%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 464 GCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCAC 523 ||| | ||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 102 GCAAACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCAC 43 Query 524 GGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 |||||||||||||||||||||| | |||||||||||||||| Sbjct 42 GGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTTA 1 >seq76551 Length=278 Score = 143 bits (158), Expect = 1e-31 Identities = 177/235 (75%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGC 110 || |||||||||||| || || || |||| |||| | | ||| | |||| |||||| Sbjct 48 GGTATTCGGAGTTTGATTAGAATT-GGTACAGCTCGCGCCGCCCGCAT-CCATTCAGTGC 105 Query 111 TCTACCTCCGGGAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||| || ||| || ||| ||| || |||||||| ||||| |||||||||| Sbjct 106 TCTACCCCCC--AAGGAATACGTCCGAGGCACTACCTAAATAGTTTTCGCGGAGAACCAG 163 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228 |||| | | ||||||||||||||||||||||||||||| ||||||| | ||||||| Sbjct 164 CTATGTCCAGGTTTGATTGGCCTTTCACCCCTATCCACAAGTCATCCGAGAATTTTTCAA 223 Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 | | |||||||||||||| || ||||| ||||||||||| ||||| Sbjct 224 CATTCACCGGTTCGGTCCTCCAGTAAGTGTTACCTTACCTTCAACCTGCTCATGG 278 >seq87782 Length=221 Score = 120 bits (132), Expect = 1e-24 Identities = 164/225 (73%), Gaps = 7/225 (3%) Strand=Plus/Plus Query 203 CCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACC 262 ||||| |||||||| || |||| | | ||||||||||||||| ||| ||||| Sbjct 1 CCACAAGTCATCCCAATCTATTGCAACAGATGCGGGTTCGGTCCTCCAGTTGGTGTTACC 60 Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT 322 | ||||||||||| ||||| ||||||||| | |||||||| | || | | || Sbjct 61 CAACCTTCAACCTGCTCATGGCTAGATCACTCGGTTTCGGGTC-TAATGCAACAAACTAT 119 Query 323 A-CGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGC--GAC 379 | |||||||||| |||||||||||||| || |||| || ||| |||| || || | Sbjct 120 ATCGCCCTATTCAGACTCGCTTTCGCTTCGCCTACACCTACCGGCTTAAGCTTGCTTGTT 179 Query 380 ACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCAC 424 ||| | || ||| | | |||| | ||||||| |||||||||| Sbjct 180 ACA---CTAAGTCGTTGACCCATTATACAAAAGGTACGCCGTCAC 221 >seq134 Length=167 Score = 114 bits (126), Expect = 5e-23 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 151 CATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGT 210 |||||||||||| || |||||| | ||||||||| |||||||||||||| |||||| | Sbjct 6 CATTTCGGGGAGTACGAGCTATTTCCCAGTTTGATTAGCCTTTCACCCCTACCCACAGAT 65 Query 211 CATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTC 270 ||||| | |||||||| | | |||||||||||||| | |||| |||| Sbjct 66 CATCCGGAAACTTTTCAACGTTTATCGGTTCGGTCCTCCAGTACCTGTTACGGCACCTTC 125 Query 271 AACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT 306 |||||| |||||| |||||||| | |||| |||| Sbjct 126 AACCTGTCCATGGGTAGATCACAAGGTTTCGCGTCT 161 >seq79188 Length=164 Score = 105 bits (116), Expect = 2e-20 Identities = 116/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 267 CTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGAT-CGTGCCACTCATACG 325 ||||||||||| |||||||||||||| | | |||||||| | || || ||| || || Sbjct 151 CTTCAACCTGCTCATGGATAGATCACCTGGTTTCGGGTCGTCATGCGACGTACTTATTCG 92 Query 326 CCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACG 385 |||||||| |||||||||||||| || |||| || |||| |||| || || || || Sbjct 91 CCCTATTCAGACTCGCTTTCGCTGCGCCTACACCTAACGGCTTAAGCTTGC-ACGGCACA 33 Query 386 CAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 || |||| | | |||| | ||||||| ||| Sbjct 32 TGAAGTCGCTGACCCATTATACAAAAGGTACG 1 >seq50808 Length=160 Score = 96.9 bits (106), Expect = 1e-17 Identities = 121/162 (75%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 178 AGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGG 237 |||||||||||||||||||||||| |||||| ||||| |||||||| Sbjct 160 AGTTTGATTGGCCTTTCACCCCTAGCCACAGCTCATCGGAGACTTTTTCAACAGGCACCC 101 Query 238 GTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGC 297 ||||||||||||| || ||||| |||||||||| |||||| ||||||||| | Sbjct 100 GTTCGGTCCTCCAGTGCGTGTTACCGCACCTTCAACCTGGCCATGGCTAGATCACTCGGT 41 Query 298 TTCGGGTCTTGAT-CGTGCCACTCATACGCCCTATTCGGACT 338 |||||||| |||| || ||| | ||||||| ||| |||| Sbjct 40 TTCGGGTC-TGATCCGACGAACTGA-ACGCCCTGTTCAGACT 1 >seq52838 Length=125 Score = 91.5 bits (100), Expect = 5e-16 Identities = 97/127 (76%), Gaps = 7/127 (6%) Strand=Plus/Plus Query 400 CATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATT 459 |||| | ||||||| |||| |||||| | || | ||| |||||| || | || Sbjct 5 CATTATACAAAAGGTACGCGGTCACCCAGGACGAAC------CTTGAGCTCCCACTGTTT 58 Query 460 GTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCC 518 ||| ||| |||||||||| |||||||||||||| | ||||| |||||||||||||| Sbjct 59 GTAAGCATTCGGTTTCAGGTGCTATTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCC 118 Query 519 CTCACGG 525 ||||||| Sbjct 119 CTCACGG 125 >seq55197 Length=124 Score = 86.0 bits (94), Expect = 2e-14 Identities = 93/122 (76%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 46 ACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGC-CCCCTAGACCATC 104 ||||| ||| ||||||||||||||| ||||||| || || ||||| | ||||| Sbjct 122 ACTTCTCGGTATTCGGAGTTTGGTTAGGATCGGTAATGCGGTAAGCACCCCTTGCCCATC 63 Query 105 CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAA 164 |||||||||||| ||| || | ||||||| || |||||||| ||||| |||||| Sbjct 62 CAGTGCTCTACCCCCGAGAGTATTCACGCGAGGCGCTACCTAAATAGCTTTCGCGGAGAA 3 Query 165 CC 166 || Sbjct 2 CC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1815578810624