Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq87782 154 4e-35 seq52838 143 7e-32 seq35313 114 3e-23 seq15711 113 1e-22 seq79188 107 5e-21 seq78966 107 5e-21 seq80822 98.7 2e-18 seq80909 78.8 2e-12 seq50808 73.4 1e-10 >seq87782 Length=221 Score = 154 bits (170), Expect = 4e-35 Identities = 180/230 (78%), Gaps = 11/230 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| || | || || |||| | | ||||||||||||||||| || ||| Sbjct 1 CCACAAGTCATCCCAAT--CTATTGCAACAGATGCGGGTTCGGTCCTCCAGTTGGT-GTT 57 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||||||| |||||||| ||| || |||||| | |||||| |||||||| | | | Sbjct 58 ACCCAACCTT-CAACCTGCTCAT-GGCTAGATCACTCGGTTT-CGGGTCTAATGCA-ACA 113 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 |||| | ||||||| | ||||||||||| |||| ||||| | |||| | |||||||| Sbjct 114 AACTATATCGCCCTATTCAGACTCGCTTT-CGCTTCGCCTACACCTACCGGCTTAAGCTT 172 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC 236 || | | | ||||||| |||||||||||||||||||||||| ||||| Sbjct 173 -GCTTGTTACACTAAGTCGTTGACCCATTATACAAAAGGTACGCCGTCAC 221 >seq52838 Length=125 Score = 143 bits (158), Expect = 7e-32 Identities = 108/125 (86%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 208 GACCCATTATACAAAAGGTACGCAGTCACCCA--ACAAAG--TGGGCTCCCACTGCTTGT 263 ||||||||||||||||||||||| |||||||| || || || |||||||||| |||| Sbjct 1 GACCCATTATACAAAAGGTACGCGGTCACCCAGGACGAACCTTGAGCTCCCACTGTTTGT 60 Query 264 ACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCT 323 | |||| |||||||||| |||||||||||||||| |||||| |||||| ||||||||| Sbjct 61 AAGCATTCGGTTTCAGGTGCTATTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCCCT 120 Query 324 CACGG 328 ||||| Sbjct 121 CACGG 125 >seq35313 Length=104 Score = 114 bits (126), Expect = 3e-23 Identities = 89/106 (84%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 208 GACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGC 267 ||||||||||||||||||||||| ||||||| | ||||||| |||| ||||| || Sbjct 1 GACCCATTATACAAAAGGTACGCCGTCACCCTT----GCGGGCTCCGACTGTTTGTAGGC 56 Query 268 ATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTC 313 || |||||||||| |||||||||||||||| |||||| |||||| Sbjct 57 ATCCGGTTTCAGGTTCTATTTCACTCCCCTTGTCGGGGTGCTTTTC 102 >seq15711 Length=102 Score = 113 bits (124), Expect = 1e-22 Identities = 87/102 (85%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 ||| ||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||| Sbjct 102 GCAAACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCTTTCCCTCA 44 Query 326 CGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 ||||||| || | |||||||||| | ||||||||| ||| Sbjct 43 CGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTT 2 >seq79188 Length=164 Score = 107 bits (118), Expect = 5e-21 Identities = 130/167 (78%), Gaps = 9/167 (5%) Strand=Plus/Minus Query 66 GTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCC 125 |||||| ||||| |||||||| ||| ||||||||| || ||||| |||||| | | Sbjct 161 GTTACCTTACCTT-CAACCTGCTCAT-GGATAGATCACCTGGTTT-CGGGTCGTCATGCG 105 Query 126 AGCGACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAG 183 | ||| | ||||||| | ||||||||||| |||| ||||| | |||| | ||||| Sbjct 104 ACGTACTTATTCGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTAACGGCTTAAG 46 Query 184 CTTTGCCACTGAAAAT-AAGTCGCTGACCCATTATACAAAAGGTACG 229 ||| ||| | | || |||||||||||||||||||||||||||||| Sbjct 45 CTTG--CACGGCACATGAAGTCGCTGACCCATTATACAAAAGGTACG 1 >seq78966 Length=110 Score = 107 bits (118), Expect = 5e-21 Identities = 91/107 (85%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 109 TTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCT 167 ||||||||||| |||||||||| | ||||||| | |||||| ||| | |||||||| Sbjct 104 TTTCGGGTCTACA-CCCAGCGACTGAATCGCCCTATTCGGACTCGGTTTCC-CTACGCCT 47 Query 168 CCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCAT 214 |||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 46 TCCCTATTCGGTTAAGC-TTGCCACTGAATGTAAGTCGCTGACCCAT 1 >seq80822 Length=126 Score = 98.7 bits (108), Expect = 2e-18 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 ||||||||||||||| |||||||||||||||| | ||||||||||||| ||||||| Sbjct 126 TTCCCTCACGGTACTGGTTCACTATCGGTCAGAAACGAGTATTTAGCCTTACGGGATGGT 67 Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||| ||||| || ||||||||||| ||| | ||||| Sbjct 66 CCCCGTGGATTCAAGCAGGGTTTCTCGTGCCCCGCCTTACTC 25 >seq80909 Length=101 Score = 78.8 bits (86), Expect = 2e-12 Identities = 79/98 (81%), Gaps = 5/98 (5%) Strand=Plus/Minus Query 135 ACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACT 193 ||||||| | ||||||||||| |||||||||| | |||| | |||||||| | | Sbjct 97 ACGCCCTGTTCAGACTCGCTTT-CGCTACGCCTACACCTAACGGCTTAAGCTTG--CTCG 41 Query 194 GAAAAT-AAGTCGCTGACCCATTATACAAAAGGTACGC 230 | | || || |||||||||||||||||||||||||||| Sbjct 40 GCAGATCAACTCGCTGACCCATTATACAAAAGGTACGC 3 >seq50808 Length=160 Score = 73.4 bits (80), Expect = 1e-10 Identities = 86/110 (78%), Gaps = 6/110 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||||||||||| | | ||||||||||||||| || ||| Sbjct 135 CCACAGCTCAT--CGGAGACTTTTTCAACAGGCACCCGTTCGGTCCTCCAGTGCGT-GTT 79 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCT 118 ||| ||| ||||||||| |||| || |||||| | ||| |||||||||| Sbjct 78 ACCGCACC-TTCAACCTGGCCAT-GGCTAGATCACTCGG-TTTCGGGTCT 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240219328384