Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq90033 113 9e-23 seq102320 80.6 5e-13 >seq90033 Length=142 Score = 113 bits (124), Expect = 9e-23 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 36 TATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGT 95 ||| || ||||||||||||||||||||||||| |||||||||||| ||| ||||| | Sbjct 1 TATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGG 60 Query 96 TCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACC 155 || |||||||| | ||| ||||| | |||||| || ||| || |||||||| | Sbjct 61 CCATCCTCTCAGATCCCCTAAACATCGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGC 120 Query 156 TAATCGGCCGCGAGCCCATCTT 177 |||| |||| ||||||||| Sbjct 121 TAATGTTCCGCATGCCCATCTT 142 >seq102320 Length=158 Score = 80.6 bits (88), Expect = 5e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||| ||||| |||| ||||||| |||| || ||||||||||||||||||||| Sbjct 93 GGCATGGCTGCGTCAGGCTTTCGCCCATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAG 152 Query 61 GAGT 64 |||| Sbjct 153 GAGT 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997289769216