Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq110519 268 3e-69 seq109390 244 4e-62 seq3230 239 2e-60 seq13299 111 6e-22 seq57305 91.5 5e-16 >seq110519 Length=3864 Score = 268 bits (296), Expect = 3e-69 Identities = 235/293 (80%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 4 ATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACGCAG 63 |||||||| || ||||||||||| || ||||||||||| |||||||||||||| |||||| Sbjct 407 ATGTACGGTGGCGGTTTTGCCACCGTGCCGGCTTACCTCGCCGACCTGTTCGGCACGCAG 466 Query 64 ATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTGGGC 123 ||||| || || |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct 467 ATGGTGGGCGCCATCCACGGCCGTCTGCTGACCGCCTGGGCCACGGCGGGCATCCTGGGC 526 Query 124 CCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCTGCG 183 ||||| | |||||||| |||| || || |||||| || ||||| | |||| | Sbjct 527 CCGGTCGTCGTGAACTACATGCGCGACTACCAGTTGGGCCTCGGCCTGCCGCGCGAGCAG 586 Query 184 GCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGCAAC 243 | |||| || ||| |||||||||| | ||| |||| || | || ||||| |||| Sbjct 587 GTCTATAACCAGACCATGTACATCCTGGTGGGCATGCTCGTCATCGGCCTCATCGCCAAC 646 Query 244 CTGCTGGTGCGTCCGGTGGCCGACAAGTACTTCATGACCGACGCCGAACTGGC 296 || || | || ||||||||||||||||||||||||||||| ||||||||||| Sbjct 647 ATGATGATCCGCCCGGTGGCCGACAAGTACTTCATGACCGAAGCCGAACTGGC 699 >seq109390 Length=14756 Score = 244 bits (270), Expect = 4e-62 Identities = 249/323 (77%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||||||||| ||||| || || || ||||| |||||||||||||||||||| || Sbjct 644 TCGATGTACGGCGGCGGTTTCGCGACCGTGCCGGCCTACCTGGCCGACCTGTTCGGCACC 703 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 |||||||| || ||||||||||| | ||||| ||||||||||| ||||| ||||| || Sbjct 704 CAGATGGTGGGCGCGATCCACGGCTGGCTGCTCACCGCCTGGGCCGCGGCCGGCGTGTTC 763 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGT--TGAACGCG 178 || ||| || |||||||||| | || || ||| | | |||||| ||| ||| Sbjct 764 GGACCGCTGCTGGTGAACTACATCCGCGAAGCGCAGATCGCCGCCGGCGTGCCGAAGGCG 823 Query 179 CTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCT 238 | |||||| ||| | || |||| | || || |||||| | | || ||| ||| Sbjct 824 C--AGGCCTACGACGTGACGATGTATGTGCTGGCCGGCCTGATCGCCGCCGGCTTCGTCT 881 Query 239 GCAACCTGCTGGTGCGTCCGGTGGCCGACAAGTACTTCATGACCGACGCCGAACTGGCCG 298 |||||||| || | |||||||| ||||||||| |||||||||||||||| |||||||||| Sbjct 882 GCAACCTGATGATCCGTCCGGTCGCCGACAAGCACTTCATGACCGACGCTGAACTGGCCG 941 Query 299 CCGAGCAAGCGCTGGGGCATGAC 321 |||| | ||| | ||||||| Sbjct 942 TCGAGAAGAAGCTCGCGCATGAC 964 >seq3230 Length=984 Score = 239 bits (264), Expect = 2e-60 Identities = 246/322 (76%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 4 ATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACGCAG 63 |||||||| |||||||||||||| || ||||| ||| |||| ||||||||||||||||| Sbjct 159 ATGTACGGTGGTGGTTTTGCCACCGTGCCGGCCTACTTGGCTGACCTGTTCGGTACGCAA 218 Query 64 ATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTGGGC 123 ||||| || || ||||||||||||||||||||||||||||| |||||||| | |||| Sbjct 219 ATGGTGGGCGCTATCCACGGTCGCCTGCTGACCGCCTGGGCTACGGCGGGCATTCTGGGT 278 Query 124 CCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCTGCG 183 |||||| | |||||||| |||| ||||| || || || | ||| || |||| | Sbjct 279 CCGGTGGTCGTGAACTACATGCGCGAGTACCAACTGGGCCTGGGCATTCCCCGCGAGCAG 338 Query 184 GCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGCAAC 243 | ||| || ||| |||||||||| | ||| ||||||| | || || || ||||| Sbjct 339 GTCTACAACCAGACCATGTACATCCTGGTCGGCATGCTGGTCATTGGTTTGATTTGCAAT 398 Query 244 CTGCTGGTGCGTCCGGTGGCCGACAAGTACTTCATGACCGACGCCGAACTGGCCGCCGAG 303 |||||||| |||||||| |||||| | |||||||| || ||||||||| || Sbjct 399 CTGCTGGTCAAGCCGGTGGCTGACAAGCATTTCATGACACCCGAAGAACTGGCCCATGAA 458 Query 304 CAAGCGCTGGGGCATGACAAAG 325 || |||| ||| || |||| Sbjct 459 AAACGCCTGGCGCACGAAAAAG 480 >seq13299 Length=31136 Score = 111 bits (122), Expect = 6e-22 Identities = 186/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 ||||||||||||||||| || || ||||| || || || ||||| || |||||||||| Sbjct 7612 TCGATGTACGGCGGTGGCTTCGCGACGGTGCCAGCCTATCTGGCGGATATGTTCGGTACC 7553 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 || | ||||| || ||||| |||||||| ||||| || ||| | | || || ||||| Sbjct 7552 AAGTTTGTCGGCGCCATCCATGGTCGCCTCCTGACGGCATGGTCGACTGCCGGTATCTTG 7493 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCT 180 || || || | || | |||| | || || ||| | |||||| ||| | Sbjct 7492 GGACCTGTCGTCGTCAGCTATATCCGCGATGCGCAGATCGCGGCCGGCGTGCCGCGCTCG 7433 Query 181 GCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGC 240 | | ||| ||| || || ||||| |||||| | || ||| | || ||||| | Sbjct 7432 GACGTCTACGACCGTACGATGCTGATCCTGGCTGGCTTCCTCGTGATTGGCTTCATTGCC 7373 Query 241 AACCTGCTGGTGCGTCCGGTGGCCGACAA 269 ||||| |||| || ||||| || || || Sbjct 7372 AACCTCATGGTCCGGCCGGTCGCAGAAAA 7344 >seq57305 Length=118 Score = 91.5 bits (100), Expect = 5e-16 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 58 ACGCAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTC 117 |||||| | ||||| || ||||| |||||| |||||||||||||| | ||||| ||| || Sbjct 2 ACGCAGTTCGTCGGCGCCATCCATGGTCGCTTGCTGACCGCCTGGTCGGCGGCCGGCATC 61 Query 118 TTGGGCCCGGTGTTGGTGAACTA 140 || || |||||| |||||||||| Sbjct 62 TTCGGTCCGGTGGTGGTGAACTA 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1774025070240