Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq48389 257 4e-66 >seq48389 Length=1922 Score = 257 bits (284), Expect = 4e-66 Identities = 300/400 (75%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 |||||||| |||| |||||||| ||| ||||| ||||||||||||||||||||||| || Sbjct 1382 CGACGGCAGCGGCCCGGTGTGGGCGGGTGGCCTATTCCCGTTCCTGTTCATCACCATCGC 1323 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||| |||||||| ||||| ||||| |||||||| || || ||||||||||| |||||| | Sbjct 1322 CTGCGGCGCGGTGTCGGGCTTCCACGCGCTGATTTCGTCCGGCACCACGCCGAAGTTGAT 1263 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 || | || ||||| ||||| | |||||| || |||| |||||| | || || || || Sbjct 1262 CGAAAACGAAAGCCACGCCCGCTTCATCGGCTATGGCGCGATGCTGGTCGAATCCTTTGT 1203 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240 |||||||||||| |||| ||||| || | || ||||||||||| |||||||| ||||| Sbjct 1202 CGCCATCATGGCGCTGGTGGCCGCGTCCATCATCGAGCCCGGCGTCTACTTCGCGATGAA 1143 Query 241 CAGCCCGGCTGCCATTGTCGGCACCGAC-GTGGTCACCGTGGCGCAAACCGTCA----GC 295 ||||||| ||| | ||||| || || | | | || |||||| || | || Sbjct 1142 CAGCCCGCTGGCCGTGCTCGGC-CCTACGGCCGAAAGCGCTGCGCAA---GTGATTTCGC 1087 Query 296 AGTTGGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAA 355 || |||||||||| | ||||| || |||| | ||| | | | || || Sbjct 1086 AG-TGGGGCTTTGTGGTCACGCCCGACATGCTGCTGCAAACCGCCAAGGACGTGGGCGAG 1028 Query 356 ACCACCATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 ||||||| | || |||||||||||||| || || |||| Sbjct 1027 CACACCATCATCGCCCGTGCCGGCGGCGCACCCACGCTGG 988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1160308289184