Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001671.1 Length=306 Score E Sequences producing significant alignments: (Bits) Value seq29105 129 1e-27 seq108715 84.2 4e-14 >seq29105 Length=716 Score = 129 bits (142), Expect = 1e-27 Identities = 180/249 (72%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 45 TCAAGGTGGAGCTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGG 104 || |||| ||||||||||||| ||||| ||||| ||||| |||||||||| |||||| | Sbjct 470 TCGAGGTCAAGCTCTATGGCTCCTTGGGGGCCACCGGCAAGGGCCACGGCACCGACAAAG 411 Query 105 CCATGTTGCTGGGCCTGGAAGGCGAACACCCCGACACCGTGAATACCGAAACCGTGGCTG 164 | || ||||||||||||||||| | ||||||| ||||| | ||| || | | | Sbjct 410 CTGTGCTGCTGGGCCTGGAAGGCCATGACCCCGAAACCGTAGACGTGGAAGCCATTCCCG 351 Query 165 CCCGCCTGG-CGCAGATGCGCAAGGACGGCCGCCTGAATTTGCTCGGTGAACACAGCATT 223 || |||| ||| ||| |||| ||||| ||| | || ||| | ||| ||| Sbjct 350 CCATGCTGGACGC-GATCCGCAGCAGCGGCCAGCTGCGTCTGGGCGGCCAGCACGTCATC 292 Query 224 GCGTTCAACGAGAAAGAACACCTGGCGATGATC---CGCAAACCCCTCGCCTACCATCCC 280 | |||||| || ||||| |||||||| ||| | ||| || |||| | | ||| || Sbjct 291 GTGTTCAAAGAAAAAGACCACCTGGCCATGTACCGGCGCGAAACCCTGCCATTCCACTCC 232 Query 281 AACGGCATG 289 || |||||| Sbjct 231 AATGGCATG 223 >seq108715 Length=4495 Score = 84.2 bits (92), Expect = 4e-14 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 56 CTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTGCTG 115 || || |||||| |||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct 4040 CTGTACGGCTCGCTGGGCGCCACCGGCAAGGGCCACGGCAGCGACAAGGCTGTGCTGCTG 4099 Query 116 GGCCTG 121 |||||| Sbjct 4100 GGCCTG 4105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 875824989632