Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq94438 197 3e-48 seq107467 172 1e-40 seq72913 168 2e-39 seq104268 82.4 2e-13 >seq94438 Length=1676 Score = 197 bits (218), Expect = 3e-48 Identities = 285/399 (71%), Gaps = 11/399 (3%) Strand=Plus/Plus Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62 ||||||||||| ||||||||||||| ||||||||||| ||| |||||| |||| ||| Sbjct 1253 ATGGTCAGCAAATCGCCGCCCACCTCGGTCCACGCCAAGCCGACGACCTGGCCGATCTGA 1312 Query 63 TCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGGAG 122 | || || ||||| |||| ||| || | || ||||||| | ||| | ||| | Sbjct 1313 TTCTTCTCTTCGGCACGGCCATAGGTGTACTTTTGCACGCCCAAATAGTCGTTGAGGTTG 1372 Query 123 TCGGCCGTGACCTTCACC-GAGAAGCGTTTTTCCAGCGCA--TGTTCCTTGACCGCCTTG 179 || ||||| ||||| ||| | | || | | | | ||| | |||| || ||||| Sbjct 1373 TCAGCCGTCACCTTGACCTGCGCAGTCATCTGCTTGAGCAGCAGGCCCTTAACGACCTTG 1432 Query 180 CGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAG 239 ||||||||||| | || | ||||||| |||||||| ||||| ||||||||||| Sbjct 1433 CGGCAGATCTTGGAGAGTTCACGCTCCAAAGAGCGCACACCAGCTTCACGGGTGTAGTAA 1492 Query 240 CGGACGATGTCGCGGATCG----TGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCC 295 || |||||||| || | | || || ||| | ||| | | |||||| || Sbjct 1493 CGCACGATGTCACGAACGGCATCTGGCGTGAGCAA----CAGCTCTTCTTCCTTCAGACC 1548 Query 296 ATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTC 355 ||| | | |||||||||| |||||||||| ||| || || | ||||||||||| Sbjct 1549 ATTATTCTTCAACTGCTTGGGCAACAGGTACTTGACGGCAATATTCGTTTTCTCGTCTTC 1608 Query 356 GGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||| || | |||||||| |||||||| |||||||| Sbjct 1609 GGTGTATCCGGCAAGGCGAATAACTTCCATACGGTCCAG 1647 >seq107467 Length=2321 Score = 172 bits (190), Expect = 1e-40 Identities = 286/404 (71%), Gaps = 17/404 (4%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||| |||| ||||||||||| | ||||||||| ||||| ||||| || || | Sbjct 737 CGATGGTGAGCAGGTCGCCGCCCACTTCGGTCCACGCGAGGCCCACAACCTGGCCAACCT 796 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | || || |||||| ||||| || | | ||||||||||| ||||||| | ||| Sbjct 797 GGTTCTTCTTCTCGGCGCGGCCGAAGTCGTACTTGCGCACGCCCAGGAAGTCGTTGAGGT 856 Query 121 AGTC------GGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGC-GCATGTTCCTTGACC 173 ||| | |||||||| | | || || || ||| | | | ||||||| Sbjct 857 TGTCTTCGGTGATGGTGACCTTGCCTTGGTAG-GTCTT--GAGCTGGACG-CCCTTGACG 912 Query 174 GCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTG 233 |||||||||||||||| | |||| ||| || || ||||| |||||||| |||||| Sbjct 913 ACCTTGCGGCAGATCTTGGACATCTCGCGTTCGAGCGAGCGCACGCCGGCTTCACGGGTG 972 Query 234 TAGTAGCGGACGATGTCGCGGATCGTGCCGACTTC---AAATTCGATCTCGCCCTTCTTC 290 |||||||||| || | | || | || ||||| ||| | ||| | ||| | | | | Sbjct 973 TAGTAGCGGATGACGCCACGCA-CG-GCCGA-TTCGGTGACTTCCAGCTCTTCGTCCGCC 1029 Query 291 AGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCG 350 | ||| ||| | |||||||| ||||| | |||||||||| ||||||| Sbjct 1030 ACGCCGTTGTTCTTGCGTTGCTTGGGGATCAGGTAGGTCTGCGCGATGTTGACCTTCTCG 1089 Query 351 TCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 || |||||||| |||| |||||| || |||||||| |||||||| Sbjct 1090 TCCTCGGTGTAGCCCGACAGGCGGATGACTTCCATGCGGTCCAG 1133 >seq72913 Length=2294 Score = 168 bits (186), Expect = 2e-39 Identities = 285/407 (70%), Gaps = 23/407 (6%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| ||||||| ||||||||||| | |||||| || || || |||||| |||| | Sbjct 1199 CGATCGTCAGCAGATCGCCGCCCACTTCGGTCCATGCGAGACCGACGACCTGGCCGATCT 1140 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 ||| || | ||||||| |||| | | | ||||| |||||||| | || | | Sbjct 1139 GATTCTCTTTTTCGGCCACGCCGAAATCGTAGCGCCGCACACCGAGGAATTTGTCGATGT 1080 Query 121 AGTCGGCCGTGAC---------CTTCACCGAGAAGCGTTTTTCCAGC-GCATGTTCCTTG 170 | | || ||| |||| |||| ||||| |||| ||| || ||| Sbjct 1079 TCTTGTTCGAGACAGCGACCTTCTTCTCCGA------TTTTTTCAGCAGCAGCATC-TTG 1027 Query 171 ACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGG 230 || | |||||||||||||||| ||| | ||| || || ||||||||||||||| || Sbjct 1026 ACGACTTTGCGGCAGATCTTCGAGATTTCGCGTTCGAGCGAACGCACACCGGCTTCCCGC 967 Query 231 GTGTAGTAGCGGACGATGTCGCGGATCGTGCCGA--CTTCAAATTCGATCTCGCCCTTCT 288 |||||||| |||| ||||||||| | | ||||| | | | |||| || | | || Sbjct 966 GTGTAGTAACGGATGATGTCGCGCA--GCGCCGATTCGGCCACCGCGATTTCCTCTTCCT 909 Query 289 TCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATG-GCGATGTTGATCTTC 347 ||| ||||| ||| |||||||| ||| || || | || |||||| || |||| Sbjct 908 TCAAACCATTCGCCTTGATCTGCTTCGGCAGCAGATA-GCGCTGCGCGATGCTGGTCTTT 850 Query 348 TCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 || |||||||||||||| | |||||||| |||||||| ||||| || Sbjct 849 TCATCTTCGGTGTAACCGGAAAGGCGAATGACTTCCATGCGGTCGAG 803 >seq104268 Length=237 Score = 82.4 bits (90), Expect = 2e-13 Identities = 137/197 (70%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 201 CGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTG 260 |||||||| ||||| || ||||| |||||||||||||||| | ||||||||||| Sbjct 11 CGCTCCAGCGACCGCACGCCAGCTTCCCGGGTGTAGTAGCGGATCAGGTCGCGGATCGCC 70 Query 261 CCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGC---CGAAATCTGCTTGGGC 317 | | || || |||| || ||||||||||| | | ||| | || | || Sbjct 71 TTGTCCGGAACGATGAACTCGGCCGGCTTCAGGCCATGGTCCTTCGACAGCTTCGGCAGC 130 Query 318 GCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATC 377 || || || ||||||| | | |||||| || |||||||| || || | ||| || Sbjct 131 ACGTGGCGCT---TGGCGATCTCCAGCTTCTCATCCTCGGTGTAGCCGGGGATGCGGATG 187 Query 378 ACTTCCATCCGGTCCAG 394 | ||||| |||||||| Sbjct 188 ATCTCCATGCGGTCCAG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157111847616