Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq111019 203 9e-50 seq108877 134 4e-29 seq18924 122 2e-25 seq64079 109 1e-21 >seq111019 Length=18303 Score = 203 bits (224), Expect = 9e-50 Identities = 290/408 (71%), Gaps = 19/408 (5%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||| | || || | ||| |||||||| ||||||||||| |||||||| ||||||| Sbjct 7247 CGATCAGGTAGACCTCGCTGGCGCCGGCGCCCAGGGCCGATTCGCGGATGGCGCGACGCT 7188 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 |||||||||| || ||| || |||||||| | | || || || |||| ||| Sbjct 7187 CCACCTGGGTCGAGCCGCAGGGCACGCAGATGATGATCCGGGGACTCGGCTT---GAACG 7131 Query 121 TGTTT---TCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGT 177 | || ||||| ||| | |||||||| | || ||||||| ||| ||| |||||| Sbjct 7130 TCTTCGAGTCGTGGACCATCTTGATGAACTGCTTGAGCATCTGCTCAGTGACCGTGAAGT 7071 Query 178 CGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGA 237 ||||||| |||||||| |||||||| || ||||| | || ||||| || ||| | Sbjct 7070 CGGCGATGACGCCGTCCTTCATCGGGCGGATGGCCTCGATGTTGCCGGGCACCTTGCCCA 7011 Query 238 GCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTC---- 293 ||||| |||||||||| ||||||||| || | |||| | | |||| | Sbjct 7010 GCATGGCCTTGGCCTCGCGGCCGACGGCCTGGATGGTCTTCT--TGCCGTTGGGGCCACC 6953 Query 294 -------CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTA 346 || || | ||| || || || || | |||||||| || |||| ||||| Sbjct 6952 CTCATGGCGGATCGACACCACGGACGGTTCGTCGAGGACGATGCCCTTGCCGCGAACGTA 6893 Query 347 AATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 || ||||||||||| ||||| ||||| |||| |||||| |||| || Sbjct 6892 GATCAGGGTGTTGGCGGTGCCGAGGTCGATGGCCAGATCGGTGGAGAA 6845 >seq108877 Length=3269 Score = 134 bits (148), Expect = 4e-29 Identities = 173/237 (73%), Gaps = 9/237 (4%) Strand=Plus/Minus Query 167 GACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGG 226 |||| |||||||||||||||||||||| |||||||| || || || | |||||||| || Sbjct 3266 GACGGTGAAGTCGGCGATCACGCCGTCCTTCATCGGGCGGATCGCCTCGATATTGCCGGG 3207 Query 227 TGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGC----AACGAC-ACTT----TT 277 ||||||||| ||||||| || |||||||||| | || | ||| || Sbjct 3206 CACTTTGCCGAGCATCTGCTTGGCTTCCTTGCCGACGGCCTGAATCGTCTTCTTGCCGTT 3147 Query 278 CTGATTACCATGGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTC 337 | | ||| | || || ||||| ||||| ||||| | || ||||| || | | Sbjct 3146 CGGGCCACCCTCCTGGCGGATCGCCACGACCGACGGCTCGTCGAGCACGATGCCCAGGCC 3087 Query 338 GCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 ||| || ||||| ||||||||||| ||||||||||| |||| |||||| | ||||| Sbjct 3086 GCGAACATAAATCAGGGTGTTGGCCGTGCCCAGGTCGATGGCCAGATCGTTCGAAAA 3030 >seq18924 Length=1740 Score = 122 bits (134), Expect = 2e-25 Identities = 171/240 (71%), Gaps = 15/240 (6%) Strand=Plus/Plus Query 167 GACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGG 226 |||| ||||||||||||||||||||||||||||||| |||||||| | || ||||| || Sbjct 4 GACGGTGAAGTCGGCGATCACGCCGTCTTTCATCGGGCGAATGGCCTCGATGTTGCCAGG 63 Query 227 TGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC 286 ||| |||||| ||||||||| | |||||||| || |||| ||||| Sbjct 64 CACTTTGCCCAGCATGGCCTTGGCCTCTTTACCGACGGCCTGGATGGTTTT---TTTACC 120 Query 287 AT-GGGTC-----------CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCG 334 | ||||| || || || || || || || || | || || || || Sbjct 121 CTGGGGTCCGCCTTCATGGCGGATAGCGACTACGGACGGTTCGTCGAGCACAATGCCCTT 180 Query 335 CTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 |||| |||||||| ||||||||||| ||||| |||||||||| | ||| ||||||| Sbjct 181 GCCGCGTACGTAAATCAGGGTGTTGGCGGTGCCAAGGTCAATGGCCAAGTCGGTGGAAAA 240 >seq64079 Length=254 Score = 109 bits (120), Expect = 1e-21 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 |||||||||| ||||||||| | | ||||| |||| ||| |||||||||||| || Sbjct 162 GTGAACCTTGCGGATGAAGTATTTGATCATCTCCTCGGCGACTTCGAAGTCGGCGATGAC 103 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 |||||| |||||| || ||||| | || | ||| || || ||||| ||||| |||| Sbjct 102 GCCGTCGCGCATCGGGCGGATGGCTTCCATGTGGCCCGGCGTGCGGCCCAGCATCTGCTT 43 Query 248 GGCCTCGGTGCCGACGGC 265 ||||||| |||| ||||| Sbjct 42 GGCCTCGATGCCCACGGC 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1352094783264