Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq35230 113 1e-22 seq58013 109 1e-21 seq23019 105 2e-20 seq70206 104 5e-20 seq108418 102 2e-19 seq5875 86.0 1e-14 seq9237 78.8 2e-12 seq17757 75.2 3e-11 >seq35230 Length=185 Score = 113 bits (124), Expect = 1e-22 Identities = 109/138 (79%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 266 AGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 |||||||| ||||||||||||| ||||| | ||||||||||||| |||||||||| |||| Sbjct 185 AGTGAGCTGTTACGCACTCTTTAAAGGAATAGCTGCTTCCAAGCTAACCTCCTGGCTGTC 126 Query 325 TACGCAACTCCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATC 382 | |||||| || |||| | | ||| ||| | || ||| ||||||||| | || Sbjct 125 TCAGCAACTGAACCGCCTTAGTTCAACTTAGTATAGATTTTGGGACCTTAGCTGTAGGTC 66 Query 383 TGGGCTGTTTCCCTCTCG 400 |||| | ||||||||||| Sbjct 65 TGGGTTCTTTCCCTCTCG 48 >seq58013 Length=129 Score = 109 bits (120), Expect = 1e-21 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| |||||||| ||||||||||| | |||| ||||||| ||||||||| || Sbjct 1 TGGCTGCTTCTAAGCCAACATCCTGGTTGTCAAAGCAAACCCACATCGTTTCCCACTTAG 60 Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 || |||| |||||||||| ||||| | ||| ||||||||| Sbjct 61 CCAGTACTTGGGGGCCTTAGATGATGGTTAGGGTTGTTTCCCT 103 >seq23019 Length=107 Score = 105 bits (116), Expect = 2e-20 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 296 GCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTC 355 |||||||| ||||||||||||||||||| || | | ||||||||||||||||| || | Sbjct 107 GCTGCTTCTAAGCCAACCTCCTGGTTGTTTATGGATTCCCACATCCTTTCCCACTTAGCC 48 Query 356 ACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | || || |||||||||| | || || ||| ||||||||||| Sbjct 47 ATCATTTGGGGGCCTTAGACGGTGGTCAGGGTTGTTTCCCTCT 5 >seq70206 Length=168 Score = 104 bits (114), Expect = 5e-20 Identities = 107/138 (78%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 266 AGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 |||||||| ||||||||||||| || || ||||||||||||||||||| |||| | |||| Sbjct 168 AGTGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTC 109 Query 325 TACGCAACTCCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATC 382 | |||| || || || | | ||| || | || ||| |||||||||||| || Sbjct 108 TGTGCAATCGGACCTCGTTAGTTCAACTTAGCGTTAATTTGGGGACCTTAGCTGATGGTC 49 Query 383 TGGGCTGTTTCCCTCTCG 400 |||| | ||||||||||| Sbjct 48 TGGGTTCTTTCCCTCTCG 31 >seq108418 Length=449 Score = 102 bits (112), Expect = 2e-19 Identities = 205/297 (69%), Gaps = 14/297 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | | ||| ||||| || Sbjct 157 CGACTACGCCTTTCGGCCTCGCCTTAGGRGCCGGCTAACCCTGCGSAGATTAACTTTACG 216 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGAT---TCCCACCCGTCACACGCTACTCATGC 117 | |||||||||||| ||||| || || | || ||||| | | || |||||||| Sbjct 217 CAGGAACCCTTGGACTTTCGGC-GAGGGTGTCTCTCACACCCTTTA-TCGTTACTCATGT 274 Query 118 CTGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCA-GCTTCAC-CACTGAC 175 | |||||| |||| | | ||||| | |||| | || |||||| || || Sbjct 275 CAGCATTCGCACTTCCGATACCTCCA-GGCGTGCTCACGCATCACCCTTCACTGGCTTAC 333 Query 176 ACGACGCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCC 235 ||||||| ||||| | | | || |||||||||| | ||| |||||| Sbjct 334 GGAACGCTCCGCTACCGCTTCTTTC-GAAGCCCGCAGCTTCGGCTCGTGGCTTGAGCCCC 392 Query 236 GCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTCTTT 287 | ||||| ||||||| | | | ||| |||||||||||| |||||| ||||| Sbjct 393 GTTACATCTTCGGCGCAGGAACCCTTGTTTAGACCAGTGAGCTGTTACGCTTTCTTT 449 >seq5875 Length=218 Score = 86.0 bits (94), Expect = 1e-14 Identities = 137/192 (71%), Gaps = 10/192 (5%) Strand=Plus/Plus Query 106 CGCTACTCATGCCTGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTT 165 ||||||||||| | ||||||||||| | | ||||| || | |||| | || ||| Sbjct 29 CGCTACTCATGTCAGCATTCTCACTTCCGATACCTCCAGCA-AGGCTCACGCCTCACCTT 87 Query 166 CACCA-CTGACACGACGCTCCCCTACC-CAACCACACAGGTTGC-----CACAGCTTCGG 218 || | || || ||||||| ||||| | |||| || ||| || | |||||| Sbjct 88 CATCGGCTTACGGAACGCTCCGCTACCGCGTGCACAGAG--TGCACACCCATACCTTCGG 145 Query 219 CGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTAC 278 || | ||| ||||||| |||||| || |||| | || ||||||||||||||| |||| Sbjct 146 CGACTGGCTTGAGCCCCGTTACATTTTCCGCGCAGGTTCGCTTGACCAGTGAGCTGTTAC 205 Query 279 GCACTCTTTCAA 290 || ||||| || Sbjct 206 GCTTTCTTTAAA 217 >seq9237 Length=112 Score = 78.8 bits (86), Expect = 2e-12 Identities = 84/110 (76%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 || |||||||||||| |||||||| ||||| ||| | || |||| || ||| ||| Sbjct 1 AATGATGGCTGCTTCTAAGCCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTTCCA 60 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || || || ||| ||| ||||||||| | |||||| ||||||||||| Sbjct 61 CTTAGCCA-ATCTTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 109 >seq17757 Length=101 Score = 75.2 bits (82), Expect = 3e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||||| |||||||||||||||| |||||| |||| | ||||| | ||| || | | Sbjct 101 CTACGCCTTTCGGCCTCGCCTTAGGGGCCGACTAACCCTGCGCAGATTAGCTTTACGCAG 42 Query 64 GAACCCTTGGATAATCGGCGGACGGGATTCCCACCC 99 |||||||||| |||||| ||| || ||||| Sbjct 41 GAACCCTTGGGCTTTCGGCGAGAGGGTCTCTCACCC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176290497024