Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq74206 187 2e-45 seq7027 178 1e-42 seq74207 172 5e-41 seq24277 136 3e-30 seq105138 123 2e-26 seq87825 73.4 3e-11 >seq74206 Length=103 Score = 187 bits (206), Expect = 2e-45 Identities = 103/103 (100%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 38 TCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTG 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103 TCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTG 44 Query 98 TGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 43 TGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 1 >seq7027 Length=121 Score = 178 bits (196), Expect = 1e-42 Identities = 112/121 (93%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 38 TCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTG 97 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 121 TCTGGGATTAGCTCCCCCTCGCGGGTTGGCAGCCCTCTGTCCCGGCCATTGTATGACGTG 62 Query 98 TGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTG 157 || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 61 TGTAGCCCTACCCATAAGGGCCATGATGACCTGACGTCATCCCCACCTTCCTCCGGTTTG 2 Query 158 T 158 | Sbjct 1 T 1 >seq74207 Length=156 Score = 172 bits (190), Expect = 5e-41 Identities = 122/140 (87%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||| Sbjct 140 TCGAGTTGCAGACTGCGATCCGGACTACGACTGGTTTTATGGGATTAGCTCCCCCTCGCG 81 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||||||| |||| |||| ||||||||||||||||| ||||| ||| |||||||||| Sbjct 80 GGTTGGCAACCCTTTGTACCAGCCATTGTATGACGTGTGTAGCCCCACCTATAAGGGCCA 21 Query 121 TGAGGACTTGACGTCATCCC 140 |||||||||||||||||||| Sbjct 20 TGAGGACTTGACGTCATCCC 1 >seq24277 Length=171 Score = 136 bits (150), Expect = 3e-30 Identities = 116/141 (82%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATAC-ACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| |||||||| ||| || || ||||| |||||| |||||||||||| Sbjct 33 TCGAGTTGCAGAGAACAATCCGAACT--GAGACGACTTTTAGGGATTGGCTCCCCCTCGC 90 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 ||| | || |||||||||| |||||||| ||||||| ||||| | |||||||| Sbjct 91 GGGATTGCAGCCCTCTGTAGTCGCCATTGTAGCACGTGTGTAGCCCACCTTGTAAGGGCC 150 Query 120 ATGAGGACTTGACGTCATCCC 140 ||||||||||||||||||||| Sbjct 151 ATGAGGACTTGACGTCATCCC 171 >seq105138 Length=149 Score = 123 bits (136), Expect = 2e-26 Identities = 112/140 (80%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| |||| | ||||||||| | |||||| Sbjct 11 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGG-CTTTTGGAGATTAGCTCACACTCGCG 69 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||| |||| ||||||||| ||||||| ||||| ||| ||||||||| Sbjct 70 TGCTCGCTGCCCACTGTCACCACCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCCA 129 Query 121 TGAGGACTTGACGTCATCCC 140 |||||||||||||||||||| Sbjct 130 TGAGGACTTGACGTCATCCC 149 >seq87825 Length=126 Score = 73.4 bits (80), Expect = 3e-11 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 112 TAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 |||||||||||||||||||||||||||||| ||||||||||| || Sbjct 126 TAAGGGCCATGAGGACTTGACGTCATCCCCGCCTTCCTCCGGATT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415551859970