Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq79112 86.0 7e-15 seq41402 77.0 3e-12 >seq79112 Length=639 Score = 86.0 bits (94), Expect = 7e-15 Identities = 93/122 (76%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 || ||||||| |||||| || || |||||| ||||||| | |||||| | | | | Sbjct 290 TGATGACCAATATCGCCGGCGTGCAGGACAAAAAAGGCAATCTCGTGACCGACCT-GTCG 232 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 ||| | | ||||| || |||||||||||||||||| |||||||||||||||||| Sbjct 231 GCGCGCGAGATCGACGAGATGTTCGCCGACGGCACCATCTCGGGCGGCATGCTGCCGAAG 172 Query 121 AT 122 || Sbjct 171 AT 170 >seq41402 Length=731 Score = 77.0 bits (84), Expect = 3e-12 Identities = 116/159 (73%), Gaps = 7/159 (4%) Strand=Plus/Plus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 |||||| ||||||| || || || ||||||||| ||| || |||||| | | |||| Sbjct 274 TGCTGAGCAACATCCCCGGCGTGCTGGACAAGGCCGGCGCACTGCTGACCGACCT-GACC 332 Query 61 ACG--CAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGA 118 | | ||| | |||| |||| |||||||||||||| | | || |||||||| || | Sbjct 333 GCTACCGACA--TCGACGGCCTGTTCGCCGACGGCACCCTGTCGGGTGGCATGCTACCCA 390 Query 119 AGATCCGTTGCGCACTGGAAGCAGTGCAAG-GCGGCGTG 156 ||||| |||| ||||| || | |||| |||| ||| Sbjct 391 AGATCGCCGGCGCGCTGGACGC-GGCCAAGAGCGGTGTG 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533824312423