Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq82561 174 3e-41 seq110270 147 4e-33 seq45519 131 3e-28 seq45309 75.2 2e-11 >seq82561 Length=31026 Score = 174 bits (192), Expect = 3e-41 Identities = 203/273 (74%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 12 GCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGG 71 |||||| || ||| || ||||||||| || |||| |||| |||| |||| || ||| Sbjct 22128 GCCGCTCGACTTCATGGCCTTCCCGACG-ATCCTGCTGGTGTCGACGATGCTGCGCCTGT 22070 Query 72 CATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTG 131 | | ||||| || |||||||| |||||| || | | ||||| |||| || || | Sbjct 22069 CGCTCAACGTGGCGTCCACGCGCGTGGTGCTGACCGAAGGCCACACCGGCGGCGCGGCGG 22010 Query 132 CCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTA 191 |||||||||| ||| | |||||||| | | | |||||||| |||||| |||||||| Sbjct 22009 CCGGTAAGGTCATCGAAGCCTTCGGCCACTTTCTTATCGGCGGCAACTACACGGTCGGTA 21950 Query 192 TCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGC 251 |||| |||||| || || | |||||| |||||| || || ||||||||||| || | Sbjct 21949 TCGTCGTGTTCATTATTCTCACGATCATTAACTTTACCGTCGTCACCAAGGGCGCGGGCC 21890 Query 252 GGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 | || |||| ||| ||||||| || |||||| Sbjct 21889 GTATCGCCGAAGTGGGCGCGCGCTTCGCCCTCG 21857 >seq110270 Length=3675 Score = 147 bits (162), Expect = 4e-33 Identities = 198/272 (73%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 12 GCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGG 71 ||||||||| ||||||| |||||||| | |||| | || |||| ||| | || ||| Sbjct 1272 GCCGCTGGACTTCGCGGCTTTCCCGACCG-TGCTGCTGCTGACGACGCTGATGCGCCTGT 1214 Query 72 CATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCAT-GCCGCT 130 | ||||||| || ||||| || || ||| |||| | ||||| |||| || | ||| Sbjct 1213 CCCTGAACGTGGCGTCCACCCGTGTCGTGCTGCTGGAGGGCCAC-ACGGGCACCGGCGCC 1155 Query 131 GCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGT 190 || || ||| ||| |||||||||| | | |||||||||| |||| || |||||| Sbjct 1154 GCAGGCCGGGTCATCGAGGCCTTCGGCCATTTCCTGATCGGCGGCAACTTCGCGGTCGGC 1095 Query 191 ATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGG 250 | | |||||||| ||||| || |||||||||| | || ||||||||||| || | | Sbjct 1094 CTGATCGTGTTCGCCATCCTCGTGGTCATCAACTTCATCGTCGTGACCAAGGGTGCAGAG 1035 Query 251 CGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 || || |||| || |||| || || || || Sbjct 1034 CGCATCGCCGAAGTCGGCGCACGCTTCACGCT 1003 >seq45519 Length=4749 Score = 131 bits (144), Expect = 3e-28 Identities = 194/274 (71%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 ||| || |||| || |||| ||||| || | |||| | | | ||| || | || | Sbjct 295 GCGACCATTGGACTTTGCGGCATTCCCCTCGG-TGCTGCTGCTCACAACCTTGATGCGGC 237 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 || | | ||||| || ||||| ||||||||| ||||| | || || ||| | || Sbjct 236 TGTCGCTCAACGTGGCATCCACCCGGGTGGTGCTGCTCGAAGGTCATACTGGCGCGGGCG 177 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 ||||||| |||||| ||||||| || | | |||||||||| |||| | ||| | Sbjct 176 CTGCCGGCGCAGTGATCGAGGCCTTTGGGCACTTTCTGATCGGCGGCAACTTTGCGGTGG 117 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | | | |||||||| |||||| || | ||||||||||| |||||||||||||| | | Sbjct 116 GCCTGATCGTGTTCGCCATCCTGGTGGTGATCAACTTTGTCGTGGTGACCAAGGGTTCGG 57 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 ||| ||| | || ||| || ||||| ||||| Sbjct 56 AGCGTATTGCGGAAGTGTCTGCACGGTTCACCCT 23 >seq45309 Length=265 Score = 75.2 bits (82), Expect = 2e-11 Identities = 151/223 (68%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 |||||||||||| ||| | ||||||||| | |||| ||| |||||||| || | Sbjct 44 GCGGCCGCTGGAATTCACCTCGTTCCCGACCG-TCCTGCTGGTCTCGACCCTGTACCGCC 102 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 ||| ||||||| ||||| || || || | | |||||||||||| ||| || Sbjct 103 TGGGCCTGAACGTGGCCTCGACCCGTCTGATCCTCGGCCACGGCCAGGAGGGCACCAGCG 162 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 ||||| ||| ||| |||||||||| | || |||| || |||| ||| ||| Sbjct 163 GGGCCGGCGCGGTCATCGAGGCCTTCGGCCACCTGATGATGCAGGGCAACTTCGTCATCG 222 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGT 231 | | | || ||| |||||| || | | ||||| |||| Sbjct 223 GCGTGATCGTCTTCATCATCCTGGTGGTGGTGAACTTCATGGT 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 808727850557