Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq107556 132 1e-28 seq110584 111 3e-22 seq82923 96.9 7e-18 seq55523 78.8 2e-12 >seq107556 Length=11153 Score = 132 bits (146), Expect = 1e-28 Identities = 221/316 (70%), Gaps = 9/316 (3%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||| ||| || || || ||||||||||| || || ||||| || | | Sbjct 10349 CGACCGCCTACGCTTCGTCGCCGAACGCGCCGAGCTCGGCGAGTCGCGCGAGGCCGTGTT 10290 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 ||| ||||| || ||||| ||| ||||||||||||| ||||||||| | || Sbjct 10289 CGCGGTGACGATGGCCGAGCAGCGCGGCAGCTTCAAGCGCTTCTGCGAGCTGATCGGACC 10230 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 |||| | ||||||| ||||||||||| || | || ||||||| || | || || Sbjct 10229 GCGCAATGTCACCGAGTTCAACTACCGCATCAGCGACGCGCGCGAGGCCCATGTGTTCGT 10170 Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGACCGA 240 ||||||||||| | | | | ||| | |||| |||| ||| ||| ||| Sbjct 10169 CGGCGTGCAGATCGGCGCGCGCGGCGAGTC---TAGCGTGCTG-GCGCGGACCT--TCGA 10116 Query 241 GCAG---GGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCG 297 |||| | ||| ||| ||||||||| | | ||||||||||||||||| ||||| Sbjct 10115 GCAGAACGACTTCAAAACGCTCGACCTGACCTACGACGAGCTGGCCAAGCTGCATATCCG 10056 Query 298 CCATATGGTCGGCGGC 313 ||| ||||||||||| Sbjct 10055 CCACCTGGTCGGCGGC 10040 >seq110584 Length=29864 Score = 111 bits (122), Expect = 3e-22 Identities = 216/316 (68%), Gaps = 11/316 (3%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||| ||||| |||||||||||| | || || ||||||||| || | Sbjct 21051 CGACCGCCTGCGCTTCGTGGCCGAGCGCGCCGAGGTCGGCGAGCACCGCGAAGCCCTCTT 20992 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 |||||| ||||| || ||| || ||||||||||||| ||||||||| |||| Sbjct 20991 CGCCGTCACCATCCCGGAGGCGCGCGGCAGCTTCAAGCGCTTCTGCGAGCTGCTGGGGCC 20932 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 |||| | ||||| |||||||| || || | | |||| || |||||||| || Sbjct 20931 GCGCAGCGTGACCGAGTTCAACTATCGCATCGCCGATGCGAGCGCTGCCCACATCTTCGT 20872 Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGA-TCGC---CAGCCTGA 236 ||||| ||| | | | || || || ||| | | |||| || | | | Sbjct 20871 GGGCGT----TGCCATCTCCAAAC---CCGACGAGGCGGCCAAACTCGCGCGCACCTTCA 20819 Query 237 CCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCC 296 || || || ||| | ||||||||| ||| | ||||| ||||||| ||| | | Sbjct 20818 CCAAGGCCGGCTTCGAGACGCTGGACCTCACCACCGACGAGCTCGCCAAGCAGCATGTGC 20759 Query 297 GCCATATGGTCGGCGG 312 |||| ||||| ||||| Sbjct 20758 GCCACATGGTGGGCGG 20743 >seq82923 Length=277 Score = 96.9 bits (106), Expect = 7e-18 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||| ||| || ||||||||||| |||| |||| || ||||| | | Sbjct 175 CGACCGCCTGCGCTTTGTCGCCGAGCGCGCCGAAGTGGGCGAAGAACGTGAAGCCCTGTT 116 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 ||||| ||||| ||||| ||| ||||||||||||| |||||||| ||| | ||| | Sbjct 115 TGCCGTCACCATCCCCGAAGAGCGCGGCAGCTTCAAGCGCTTCTGCGAAGCCATAGGCCA 56 Query 121 G 121 | Sbjct 55 G 55 >seq55523 Length=1722 Score = 78.8 bits (86), Expect = 2e-12 Identities = 80/104 (77%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 223 GATCGCCAG---CCTGACCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCT 279 ||||||||| | | | | |||| || ||| || ||||||||||| | || ||||| Sbjct 1627 GATCGCCAGTAACTTCAGCAAGCACGGCTTCAAGGCATTGGACCTGACCCACAACGAGCT 1568 Query 280 GGCCAAGCTGCACATCCGCCATATGGTCGGCGGCCATGCGGCGC 323 ||||||| ||| |||||||| ||||| |||||||| |||||| Sbjct 1567 GGCCAAGGAGCATATCCGCCACATGGTGGGCGGCCAGTCGGCGC 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026057743328