Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq107909 149 1e-33 seq107520 131 3e-28 seq34259 114 2e-23 seq87182 95.1 2e-17 seq107387 93.3 7e-17 >seq107909 Length=14595 Score = 149 bits (164), Expect = 1e-33 Identities = 153/199 (77%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 |||||||||||||||| | || | || || ||| | |||||||||| || || || Sbjct 9047 GCAAGGAAGGCTTCTT-GCGGCACCTCGACCGAGCCGATCTGCTTCATGCGCTTCTTGCC 9105 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 |||||||||||| || |||||||||||||| ||| | | ||| ||||| |||||||| || Sbjct 9106 GGCCTTTTGCTTTTCCAGCAGCTTGCGCTTGCGGGTGATGTCGCCGCCATAGCATTTTGC 9165 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 ||| |||||||| | || ||||||| | || || ||||| | |||| ||||| Sbjct 9166 CAGCACGTTCTTGCGCAGCGCCTTGATGTTCTCGCGGGCGATGATGTTGGCGCCGATGGC 9225 Query 276 GGCCTGGATCGCGACGTCG 294 ||||||||| || |||||| Sbjct 9226 GGCCTGGATGGCCACGTCG 9244 >seq107520 Length=11284 Score = 131 bits (144), Expect = 3e-28 Identities = 154/203 (76%), Gaps = 9/203 (4%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || ||||| ||||||| | ||| |||| || ||||| | |||||||| |||||||| Sbjct 7348 GCCAGGAATGCTTCTTGGGGGA-TTTCGACCGATCCCACCTGTTTCATGCGCTTTTTACC 7406 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 ||| ||||||||||| ||||| || |||||||| | ||| ||||||||||| ||||| Sbjct 7407 GGCTTTTTGCTTCTCGAGCAGTTTCTTTTTACGGCTGATGTCGCCGCCGTAGCACTTGGC 7466 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTC-CGCGCAATGATC---TGCCCGCCAA 271 ||| |||||||| | | |||||||| | || ||||| | |||| | |||| | Sbjct 7467 CAGCACGTTCTTGCGCAAGGCCTTGAC---GTTCTCGCGCGA-GATCACATTGGCGCCGA 7522 Query 272 TGGCGGCCTGGATCGCGACGTCG 294 | || |||||||| || |||||| Sbjct 7523 TCGCCGCCTGGATGGCAACGTCG 7545 >seq34259 Length=2850 Score = 114 bits (126), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 5/201 (2%) Strand=Plus/Minus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || || || || |||| | || | ||| || ||| | | ||||||| ||||||||||| Sbjct 714 GCCAGAAAAGCCTCTT-GCGGGACTTCTACCGAGCCGATTTGCTTCATACGTTTTTTACC 656 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 ||||||||| || ||||| || || ||| || | |||||||||||||| ||||| Sbjct 655 GGCCTTTTGTTTTTCAAGGAGTTTCTTCTTGCGCGAAATATCACCGCCGTAGCACTTGGC 596 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCG--CCAATG 273 | |||||||| | || || |||| | |||||||| || ||| | |||||| Sbjct 595 GATCACGTTCTTGCGCAGCGCTTTGATTGTCTCACGCGCAATAAT--GCCGGAGCCAATG 538 Query 274 GCGGCCTGGATCGCGACGTCG 294 |||||||||||||| |||||| Sbjct 537 GCGGCCTGGATCGCCACGTCG 517 >seq87182 Length=109 Score = 95.1 bits (104), Expect = 2e-17 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 |||||| || || |||||||||||||| || |||||||||||||| ||||| |||| || Sbjct 10 CATGCGCTTCTTGCCGGCCTTTTGCTTGTCCAGCAGCTTGCGCTTGCGGCTCGCGTCGCC 69 Query 201 GCCGTAGCATTTGGC 215 ||||||||||||||| Sbjct 70 GCCGTAGCATTTGGC 84 >seq107387 Length=34883 Score = 93.3 bits (102), Expect = 7e-17 Identities = 97/126 (77%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 |||||| || ||||||||| | | || ||||| || ||||| | || |||||| || Sbjct 29205 AGCACCTGAATGAAGGCTTCCT-GCGGGATTTCGACCTTGCCGAACTGCCGCATGCGCTT 29263 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 || || |||| ||||| || |||||||||||||| ||| | |||| ||||||||||| Sbjct 29264 CTTGCCTTCCTTCTGCTTGTCGAGCAGCTTGCGCTTGCGGGTGGCGTCGCCGCCGTAGCA 29323 Query 210 TTTGGC 215 ||||| Sbjct 29324 CTTGGC 29329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840693378247