Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq108036 125 2e-26 seq17772 95.1 3e-17 seq13299 86.0 1e-14 seq67259 80.6 6e-13 seq32118 80.6 6e-13 seq83454 77.0 7e-12 seq108625 73.4 9e-11 >seq108036 Length=10138 Score = 125 bits (138), Expect = 2e-26 Identities = 113/141 (80%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 245 TCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCT 304 |||| | ||||||||||||||| || ||||||||||||||||| || |||||||||||| Sbjct 1 TCCAGAATCCAGGTGTCCTTGGTGCCGCCGCCTTGCGACGAGTTCACCACCAGCGAGCCT 60 Query 305 TCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCA---GGCGGGTTTCCTTGCCCGAG 361 || | ||||| |||||||||| ||| |||||||||| | |||| || ||||| Sbjct 61 TCTTCGAGCGCGACGCGGGTCAGGCCGCCGGGCACCATCGAGATGGTT---TTCCCCGAC 117 Query 362 AGCACGAAGGGTCGCAAGTCG 382 ||||| || || |||| |||| Sbjct 118 AGCACAAACGGCCGCAGGTCG 138 >seq17772 Length=797 Score = 95.1 bits (104), Expect = 3e-17 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 246 CCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTT 305 ||| ||||||||||||||||| || ||||| || || ||||| ||||||||||| Sbjct 301 CCAGCACCCAGGTGTCCTTGGAGCCGCCGCCCTGGCTGGAATTGACCACCAGCGAGCCAC 242 Query 306 CCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAGAGCA 365 |||||||||||||||||||| | ||||| | ||| | || |||||| || | Sbjct 241 GCTTCAGCGCCACGCGGGTCAGCGCGCCGGGTGTGACAATGGTCTTCTCGCCCGACAGGA 182 Query 366 CGAAGGGTCGCAAGTCG 382 |||||| |||| |||| Sbjct 181 TGAAGGGGCGCAGGTCG 165 >seq13299 Length=31136 Score = 86.0 bits (94), Expect = 1e-14 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 245 TCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCT 304 || || |||||||| ||||| || || ||||| || || ||||||||||||||||| Sbjct 25122 TCGACGACCCAGGTATCCTTCGTGCCGCCGCCCTGACTGGAATTGACGACCAGCGAGCCG 25063 Query 305 TCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGG 346 || |||||||| || ||||| | |||||| || ||| |||| Sbjct 25062 TCTTTCAGCGCAACACGGGTGAGGCCACCCGGAACCGTGCGG 25021 >seq67259 Length=759 Score = 80.6 bits (88), Expect = 6e-13 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 246 CCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTT 305 ||| ||||||||| || || | || ||||||||||| ||| || |||||||| || | Sbjct 41 CCAGCACCCAGGTATCTTTACTGCCCCCGCCTTGCGAGCTGTTTACCACCAGCGATCCCT 100 Query 306 CCTTCAGCGCCACGCGGGTCAAGCCACCGGGCAC 339 | ||||| ||||| ||||| ||||| ||||| || Sbjct 101 CTTTCAGTGCCACACGGGTTAAGCCGCCGGGTAC 134 >seq32118 Length=237 Score = 80.6 bits (88), Expect = 6e-13 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 246 CCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTT 305 ||| |||||| || ||||| | |||||||| ||||| ||| || ||||| || |||| Sbjct 42 CCAGCACCCAAGTATCCTTACTACCACCGCCCTGCGAACTGTTCACCACCAGTGATCCTT 101 Query 306 CCTTCAGCGCCACGCGGGTCAAGCCACCGGGCAC 339 | || ||||||||||| ||||| || ||||| || Sbjct 102 CTTTAAGCGCCACGCGCGTCAAACCGCCGGGAAC 135 >seq83454 Length=290 Score = 77.0 bits (84), Expect = 7e-12 Identities = 96/132 (73%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 246 CCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTT 305 ||| ||||||||||||||| | || ||||| || || || || ||||||||||| Sbjct 158 CCAGCACCCAGGTGTCCTTTGAGCCGCCGCCCTGGCTGGAATTCACCACCAGCGAGCCGA 217 Query 306 CCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAGAGCA 365 ||||| ||||||||| |||| | | || || || | || | || |||||| || | Sbjct 218 GCTTCAACGCCACGCGAGTCAGGGCGCCTGGGGTCACGATCGTCTTCTCGCCCGACAGGA 277 Query 366 CGAAGGGTCGCA 377 |||||| |||| Sbjct 278 TGAAGGGCCGCA 289 >seq108625 Length=22526 Score = 73.4 bits (80), Expect = 9e-11 Identities = 103/145 (71%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 237 CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCA 296 ||||| | |||| |||||||||||||||||| || ||||| || |||||| || | Sbjct 66 CTCAGTCTTCCAGCACCCAGGTGTCCTTGGTCCCGCCGCCCTGGCTGCTGTTGACCACGA 125 Query 297 GCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGC 356 | || || ||||||| || || || || | || || ||||||| || | | Sbjct 126 GTGAACCCTCCTTCAATGCAACCCGCGTGAGCCCGCCAGGCACCATTCGTACGGACGACC 185 Query 357 CCGAGAGCACGAAGGGTCGCAAGTC 381 |||| ||||||||||| | || ||| Sbjct 186 CCGACAGCACGAAGGGCCTCAGGTC 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1118754548800