Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq102320 131 4e-28 seq90033 129 1e-27 seq100101 84.2 5e-14 seq2128 84.2 5e-14 seq71779 78.8 2e-12 >seq102320 Length=158 Score = 131 bits (144), Expect = 4e-28 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| || ||| ||||| |||| |||||||||||||||| |||||||| |||||||| Sbjct 62 TTTACAATCCTAAGACCTTCATCATTCACGCGGCATGGCTGCGTCAGGCTTTCGCCCATT 121 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 99 | |||| |||||||||||||||||||||||||||| Sbjct 122 GCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGT 156 >seq90033 Length=142 Score = 129 bits (142), Expect = 1e-27 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct 1 TATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGG 60 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||||| | ||| ||||| |||| ||| ||| ||||| ||||||||| Sbjct 61 CCATCCTCTCAGATCCCCTAAACATCGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGC 120 Query 191 TAAT 194 |||| Sbjct 121 TAAT 124 >seq100101 Length=132 Score = 84.2 bits (92), Expect = 5e-14 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct 56 TTTACAACCCGAAGGCCTTCTTCCCGCACGCGGCATGGCTGGATCAGGCTTGCGCC 1 >seq2128 Length=150 Score = 84.2 bits (92), Expect = 5e-14 Identities = 113/160 (71%), Gaps = 18/160 (11%) Strand=Plus/Plus Query 255 TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGA 314 |||| |||||||||| |||||| ||| | || ||| ||||| |||||| Sbjct 4 TTATCCGGTATTAGCTCAAGTTTCCCTGAGTTGTTCCGAACCAAAAGGCACGTTCCCACG 63 Query 315 CATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCG 374 |||||||||||||||||||| || ||||| | | |||||| Sbjct 64 TGTTACTCACCCGTCCGCCACTAATCC-CGAAGGATC-----------------CGTTCG 105 Query 375 ACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||||||||||||| |||||| Sbjct 106 ACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCGCTCTGAG 145 >seq71779 Length=145 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 |||||||||||||||||||| || | |||||||||| |||| |||||||||||||| Sbjct 90 TTTACAACCCGAAGGCCTTCATCCTGCACGCGGCATTGCTGGATCAGGCTTGCGCC 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221040678976