Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq102320 168 2e-39 seq90033 143 8e-32 seq56943 111 5e-22 seq64869 104 7e-20 seq8699 82.4 2e-13 >seq102320 Length=158 Score = 168 bits (186), Expect = 2e-39 Identities = 132/158 (84%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 261 AAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGC 320 |||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||| Sbjct 158 AAACTCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGACGCAGC 99 Query 321 AACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAAT 380 | ||||||||| |||||||| ||| || | ||||| ||| || | ||| |||||| Sbjct 98 CATGCCGCGTGAATGATGAAGGTCTTAGGATTGTAAAATTCTTTCACCGGGGACGATAAT 39 Query 381 GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGC 418 |||||||| | || |||||||||||||||| ||||| Sbjct 38 GACGGTACCCGGAGAAGAAGCCCCGGCTAACTTCGTGC 1 >seq90033 Length=142 Score = 143 bits (158), Expect = 8e-32 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||||||||||||||||||||||||||||||||| ||||| ||| || |||||||| Sbjct 124 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCTACGATGTTTAGGGGATCTGAGAGG 65 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 || | ||||| ||| |||||||||||| ||| ||||||||||||||||||||| || Sbjct 64 ATGGCCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGCAGTAAGG 5 Query 288 AATA 291 |||| Sbjct 4 AATA 1 >seq56943 Length=112 Score = 111 bits (122), Expect = 5e-22 Identities = 94/113 (83%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 310 CCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCA 369 |||||| |||| | |||||||||| ||||| |||||| |||| |||||||||| || Sbjct 1 CCTGATCCAGCCATGCCGCGTGAGTGATGACGGCCTTAGGGTTGTAAAGCTCTTTCGCAC 60 Query 370 AGGAAGATAATGACGGTACT-TGAGGAGGAAGCCCCGGCTAACTACGTGCCAG 421 | || ||||||||||||| | ||| || |||||||||||||||| |||||||| Sbjct 61 ACGAGGATAATGACGGTAGTGTGA-GAAGAAGCCCCGGCTAACTTCGTGCCAG 112 >seq64869 Length=103 Score = 104 bits (114), Expect = 7e-20 Identities = 71/79 (90%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTA 473 ||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||| Sbjct 1 CGTGCCAGCAGCCGCGGTAATACGTAGGGTCCGAGCGTTGTCCGGAATTACT-GGGCGTA 59 Query 474 AAGGGTGCGTAGGTGGTTT 492 ||| | |||||||||||| Sbjct 60 AAGAGCTCGTAGGTGGTTT 78 >seq8699 Length=112 Score = 82.4 bits (90), Expect = 2e-13 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 423 AGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCG 482 ||||||||||||||| |||| || ||||||||||||| | ||| ||| ||||||||||| Sbjct 1 AGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCACT-GGGTTTAAAGGGTGCG 59 Query 483 TAGGTGG 489 ||||||| Sbjct 60 TAGGTGG 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495934653824