Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq70206 217 5e-54 seq74952 188 2e-45 seq76551 179 1e-42 seq134 176 2e-41 seq35230 159 1e-36 seq50808 150 6e-34 seq50793 102 3e-19 seq87782 93.3 1e-16 seq78966 75.2 4e-11 >seq70206 Length=168 Score = 217 bits (240), Expect = 5e-54 Identities = 149/168 (89%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 ||||||| |||||||||||||||| || |||||||| ||||| || ||| |||||||| Sbjct 1 AGTGAGGCTATGGGTGCTAAGGTCCATGGCCGAGAGGGAAAGAACCCAGACCATCAGCTA 60 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||| ||| |||| | |||||||| ||||||||| ||| |||||| ||||||||||||| Sbjct 61 AGGTCCCCAAATTAACGCTAAGTTGAACTAACGAGGTCCGATTGCACAGACAGCTAGGAT 120 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 168 >seq74952 Length=182 Score = 188 bits (208), Expect = 2e-45 Identities = 151/182 (83%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 183 CGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCT 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCT 60 Query 243 AGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGC 302 |||||||||||||||||||||||||||||||||||||||||| | || ||| | | Sbjct 61 AGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATACCGATGAGTGCGAGCTT 120 Query 303 GGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAG 362 ||||| || ||||||||| ||||| | ||||| || || || ||| ||| Sbjct 121 GGGAGACAGACGTCGGGTGCTAACGTCCGGCGTCAAGAGGGAAACAACCCAGACCGCCAG 180 Query 363 CT 364 || Sbjct 181 CT 182 >seq76551 Length=278 Score = 179 bits (198), Expect = 1e-42 Identities = 214/281 (76%), Gaps = 11/281 (4%) Strand=Plus/Minus Query 57 CCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAA 116 ||||| |||| ||||||| |||||||| ||||||| ||||||| ||||||||| Sbjct 278 CCATGAGCAGGTTGAAGGTAAGGTAACACTTACTGGAGGACCGAACCGGTGAATGTTGAA 219 Query 117 AAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGT 176 ||||| |||||| ||||| |||||||||||||| || ||||| |||| ||||||||| Sbjct 218 AAATTCTCGGATGACTTGTGGATAGGGGTGAAAGGCCAATCAAACCTGGACATAGCTGGT 159 Query 177 TCTCTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTG 234 |||| |||||||||||||||||||||||| | |||| || | ||||||||||||||| Sbjct 158 TCTCCGCGAAAACTATTTAGGTAGTGCCTCGGACGTAT-TCCTTGGGGGGTAGAGCACTG 100 Query 235 TTATGGCTAGGGGGTCATTGCGA-CT-TACCAAACCATTGCAAACTCCGAATGCGCATCA 292 |||| | | || | |||| || |||||| | |||||||||||| | || | Sbjct 99 -AATGG--ATGCGGGCGGCGCGAGCTGTACCAATTCTAATCAAACTCCGAATACCCAAGA 43 Query 293 GTTTTA-CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 | || ||| | || | ||| ||||||||| |||||| Sbjct 42 GAACTATCCGGGAGACACACGGC--GGGTGCTAACGTCCGT 4 >seq134 Length=167 Score = 176 bits (194), Expect = 2e-41 Identities = 135/160 (84%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 28 GGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGC 87 ||| |||||| ||||||| ||||||||||||||| |||| ||||||||| |||||| | Sbjct 167 GGGGGTAGACGCGAAACCTTGTGATCTACCCATGGACAGGTTGAAGGTGCCGTAACAGGT 108 Query 88 CCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGA 147 ||||||| ||||||| | || |||||||| || |||||| |||||||||||||||| Sbjct 107 ACTGGAGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGATCTGTGGGTAGGGGTGA 48 Query 148 AAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 |||||||| |||||| |||||||||| || ||| |||||| Sbjct 47 AAGGCTAATCAAACTGGGAAATAGCTCGTACTCCCCGAAA 8 >seq35230 Length=185 Score = 159 bits (176), Expect = 1e-36 Identities = 135/166 (81%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 308 TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAG 367 ||||||| ||||||||||||||||| |||||||| ||||| || ||| |||||||| Sbjct 20 TGAGGGCGCGGGTGCTAAGGTCCGTGTCCGAGAGGGAAAGAACCCAGACCTACAGCTAAG 79 Query 368 GCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGT 427 | ||| |||| ||||||| |||||| | || ||||| ||||||| |||| || Sbjct 80 GTCCCAAAATCTATACTAAGTTGAACTAAGGCGGTTCAGTTGCTGAGACAGCCAGGAGGT 139 Query 428 TGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 | ||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 140 TAGCTTGGAAGCAGCTATTCCTTTAAAGAGTGCGTAACAGCTCACT 185 >seq50808 Length=160 Score = 150 bits (166), Expect = 6e-34 Identities = 130/160 (81%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 4 AGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGG 62 |||| |||||||||| |||| | || |||||||||||| ||||||||| |||||| Sbjct 1 AGTCTGAACAGGGCGTTCAGTTCGTCGGATCAGACCCGAAACCGAGTGATCTAGCCATGG 60 Query 63 CCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTA 122 ||||| ||||||||||||||||||| ||||||| |||||| |||||||||| | Sbjct 61 CCAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAACGGGTGCCTGTTGAAAAAGTC 120 Query 123 GGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACT 162 |||||||||||| |||||||||||||| || |||||| Sbjct 121 TCCGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACT 160 >seq50793 Length=184 Score = 102 bits (112), Expect = 3e-19 Identities = 93/114 (82%), Gaps = 10/114 (9%) Strand=Plus/Plus Query 453 AAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAG 512 |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| Sbjct 1 AAGAGTGCGTAACAGCTCACTAGTCGAGCGGTCGGGCATGGATAATAATCGGGCATTAAA 60 Query 513 TTGTCTACCGAAGCAGTGGGATCATTTA----TATG-ATC-GGTAGGGGAGCAT 560 || ||||||||| ||| ||||| ||| ||| ||||||||||||| Sbjct 61 CAGTATACCGAAGCTATGG----ATTTACAGCAATGTATCTGGTAGGGGAGCAT 110 >seq87782 Length=221 Score = 93.3 bits (102), Expect = 1e-16 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTG---TAGACCCGAAACCAAGTGATCTACCC 58 |||||| ||| ||||||| | | | | | || ||||||||||||| ||||||||| || Sbjct 138 CGAGTCTGAATAGGGCGATA-TAGTTTGTTGCATTAGACCCGAAACCGAGTGATCTAGCC 80 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||| |||| ||||||| |||||||| ||||||| |||||||| | ||||| || Sbjct 79 ATGAGCAGGTTGAAGGTTGGGTAACACCAACTGGAGGACCGAACCCGCATCTGTTGCAAT 20 Query 119 ATTAGGGGATGAGCTGTGG 137 | ||||||| ||||| Sbjct 19 AGATTGGGATGACTTGTGG 1 >seq78966 Length=110 Score = 75.2 bits (82), Expect = 4e-11 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA--CAGTCGCTGGGTGTAGACCCGAAACCAAGT 49 |||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 61 CGAGTCCGAATAGGGCGATTCAGTCGCTGGGTGTAGACCCGAAACCAAGT 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1687721147904