Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq24559 280 3e-73 seq110687 206 5e-51 seq98757 179 7e-43 seq108801 131 3e-28 seq90866 111 3e-22 seq83290 102 1e-19 seq15020 96.9 6e-18 seq37147 95.1 2e-17 seq81606 82.4 1e-13 seq64250 82.4 1e-13 seq109157 75.2 2e-11 >seq24559 Length=188 Score = 280 bits (310), Expect = 3e-73 Identities = 161/165 (98%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 87 TTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATAC 146 ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct 1 TTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCTTTTAGGTCATTGCATACTGAATAC 60 Query 147 ATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAAT 206 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 61 ATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAATAAAT 120 Query 207 CAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 165 >seq110687 Length=877 Score = 206 bits (228), Expect = 5e-51 Identities = 155/182 (85%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 697 AGTGCAYRTGGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATA 756 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| |||||||||| |||||||||||||||||||||| | Sbjct 757 AGCTTCGGGGAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC-AC 815 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 |||| ||| || |||| |||||||||||||||||| | |||||| || |||||||||| Sbjct 816 CCTTAGGGGTATCGCATACTGAATACATAGGTATGCGAGGCGAACCGGGTGAACTGAAAC 875 Query 181 AT 182 || Sbjct 876 AT 877 >seq98757 Length=104 Score = 179 bits (198), Expect = 7e-43 Identities = 102/104 (98%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 13 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 60 Query 73 TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACC 116 |||||||||| |||||||||||||||||||||||||||||||| Sbjct 61 CGAGCAAACACGCTTTGATCCGCAGATTTCCGAATGGGGAAACC 104 >seq108801 Length=1840 Score = 131 bits (144), Expect = 3e-28 Identities = 167/229 (73%), Gaps = 17/229 (7%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 |||||||||||||||| | | |||||||||||||||| ||| ||||||||| ||| Sbjct 1496 GGTGGATGCCTTGGCGCTAAGAGGCGATGAAGGACGTGGTACGCTGCGATAAGACATGGG 1555 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| || |||| |||||||||| || ||||||||||| ||||| || |||| Sbjct 1556 GAG-CCGCGAACAGGCTTTGATCCGTGTATCTCCGAATGGGGCAACCCACCCGCAAGGGT 1614 Query 130 CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTA 189 || | | | ||| |||||||| || ||||||||||||||||||| Sbjct 1615 ------ATCCCGCA-----AGG-----GAAGCGAACCTGGGGAACTGAAACATCTAAGTA 1658 Query 190 GCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 | |||||| || |||||| |||| ||| |||||||||||||||| Sbjct 1659 CCCAGAGGAAAGGACATCAACAGAGACTCCGCTAGTAGTGGCGAGCGAA 1707 >seq90866 Length=150 Score = 111 bits (122), Expect = 3e-22 Identities = 97/117 (83%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGC-GATTACAGGCGATGAAGGACGTAGTAGCTTGCGAT 59 || || || ||||||||||||||| || | ||||||||||||||||| | | |||||| Sbjct 115 AGGGCGCACGGTGGATGCCTTGGCAGAAT-CAGGCGATGAAGGACGTGGCAAGCTGCGAT 57 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACC 116 ||||| ||||||| ||| ||| | |||||||| ||||||||||||||||||||| Sbjct 56 AAGCTTCGGGGAG-CCGCACACAGGCGTTGATCCGGAGATTTCCGAATGGGGAAACC 1 >seq83290 Length=109 Score = 102 bits (112), Expect = 1e-19 Identities = 82/98 (84%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 85 CTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAAT 144 |||||||||| ||||||| |||||||||||||| ||||| ||| || ||||| ||||| Sbjct 13 CTTTGATCCGGAGATTTCTGAATGGGGAAACCCA-CCCTTCGGGGTATCGCATGATGAAT 71 Query 145 ACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACAT 182 |||||| |||| | |||||| || |||||||||||| Sbjct 72 ACATAGTCATGCGAGGCGAACCGGGTGAACTGAAACAT 109 >seq15020 Length=215 Score = 96.9 bits (106), Expect = 6e-18 Identities = 121/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 158 AAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATT 217 |||| ||| ||| |||||||||||||| |||| | | |||||| || ||||||||||| | Sbjct 5 AAGCAAACCCGGGGAACTGAAACATCTCAGTACCCGGAGGAAAGGACATCAACCGAGACT 64 Query 218 CCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTTACGAGATAGTTGAATTGATAGTG 276 ||| |||||||||||||||| |||| | ||| | | | || || | || Sbjct 65 CCCGTAGTAGTGGCGAGCGAACCGGGACCAGGCCAGT--GCTGTCGTGACAT--AAAGCT 120 Query 277 GAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCGTA 319 |||| |||| || |||||||| |||||||||||||||| Sbjct 121 GAATGTGCTGGGAAGCACAGCCATAGTGGGTGATAGCCCCGTA 163 >seq37147 Length=122 Score = 95.1 bits (104), Expect = 2e-17 Identities = 84/104 (81%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 13 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 72 |||||||||||| | | |||||||||| ||||| || ||||||||||| |||||| Sbjct 3 GGATGCCTTGGCTCTCAGAGGCGATGAAAGACGTGATAAGCTGCGATAAGCTTCGGGGA- 61 Query 73 TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACC 116 | |||||| | |||||||| ||||||| ||||||||||||| Sbjct 62 TTAGCAAATATGAATTGATCCGAAGATTTCTGAATGGGGAAACC 105 >seq81606 Length=165 Score = 82.4 bits (90), Expect = 1e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 215 ATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAG 274 ||||| |||||||||||||||||||| ||| ||||| | | ||||| | || || Sbjct 165 ATTCCGAAAGTAGTGGCGAGCGAAATCGGAAAAGCCTGTTAGTGATAGCGCGACTGTTAA 106 Query 275 TGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCGTA 319 ||||| |||||| ||||||||||||||||||||||||| Sbjct 105 CGGAATAGCTTGGAAAAGCTAGCCATAGCGGGTGATAGCCCCGTA 61 >seq64250 Length=137 Score = 82.4 bits (90), Expect = 1e-13 Identities = 83/107 (78%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 13 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 72 |||||||| ||| | | |||||| ||||||||| || ||||| |||||| ||||| Sbjct 31 GGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTGTGGGGA- 89 Query 73 TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||||| | ||||||| ||||| ||||||||||| ||||||| Sbjct 90 TCCGCAAATAGGAATTGATCCACAGATGTCCGAATGGGGCAACCCGG 136 >seq109157 Length=789 Score = 75.2 bits (82), Expect = 2e-11 Identities = 59/71 (83%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| || | |||||| ||| ||||| |||| ||||||| Sbjct 719 AGAGCATGTGGTGGATGCCTTGGCAATGATAGGCGACGAAAGACGTGATAGCCTGCGATA 778 Query 61 AGCTGCGGGGA 71 |||| |||||| Sbjct 779 AGCTTCGGGGA 789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917378730016