Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq67142 257 5e-66 seq23097 123 8e-26 >seq67142 Length=770 Score = 257 bits (284), Expect = 5e-66 Identities = 218/268 (81%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||||| | || ||||||||||| ||| || || Sbjct 265 CTTCATTCGATAAGTGAAGCAACGATCCGAGTGGTGGTATTTCATTTGTGCTTGC---GC 209 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 208 TACCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 149 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 148 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 89 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 88 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 29 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTC 445 |||||||||||||||||||||||||||| Sbjct 28 CGAGGCATTTGGCTACCTTAAGAGAGTC 1 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 572 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 513 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 512 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 465 >seq23097 Length=1493 Score = 123 bits (136), Expect = 8e-26 Identities = 87/98 (89%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 |||||||||||||||||||||||||||||| | | ||||| || |||| ||||||||||| Sbjct 1493 GTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGGTGAATCTCGTCACATTGACATTCAG 1434 Query 503 AGCACTGGGCAGAAATCACATTGCGTCA-ACATCACTT 539 |||||||||||||||||| ||||| || ||| ||||| Sbjct 1433 AGCACTGGGCAGAAATCAGTTTGCGACATACACCACTT 1396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633381641248