Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq90033 149 1e-33 seq102320 109 1e-21 seq8617 77.0 7e-12 >seq90033 Length=142 Score = 149 bits (164), Expect = 1e-33 Identities = 117/140 (84%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 156 TATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGA 215 ||||||| ||||||||||||||||||||| ||| |||||||||||| ||| |||||||| Sbjct 1 TATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGG 60 Query 216 CCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACC 275 || |||||||||| |||||| |||||||| || ||| ||||||||| || |||| | Sbjct 61 CCATCCTCTCAGATCCCCTAAACATCGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGC 120 Query 276 TAATGGAACGCATCCCCATC 295 ||||| ||||| |||||| Sbjct 121 TAATGTTCCGCATGCCCATC 140 >seq102320 Length=158 Score = 109 bits (120), Expect = 1e-21 Identities = 88/105 (84%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||||| |||||||||| ||| |||||||| ||||||| | |||||| |||| || | Sbjct 55 AAAGAATTTTACAATCCTAAGA-CCTTCATCATTCACGCGGCATGGCTGCGTCAGGCTTT 113 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 || |||||| ||| ||||| |||||||||||||||||||||||| Sbjct 114 CGCCCATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTTT 158 >seq8617 Length=105 Score = 77.0 bits (84), Expect = 7e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 5 GCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTC-CCACACGTGGA 63 ||||||||||||||||||||| ||||||| | |||||| | ||||| |||||| Sbjct 1 GCTGGCACGGAGTTAGCCGATCCTTATTCTCAGAGTACATTC-AGCTCATTACACGTAAT 59 Query 64 AGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAG 102 | ||||||||| | ||||| ||||||||| |||||| Sbjct 60 GAGGTTTATTCCCCTGCAAAAGCAGTTTACAACCCGTAG 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067611483712