Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq17054 141 3e-31 seq48244 107 6e-21 seq105933 87.8 5e-15 >seq17054 Length=273 Score = 141 bits (156), Expect = 3e-31 Identities = 102/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| |||||||||||||| || | | ||||||||||||| ||||||||||||| ||| Sbjct 120 TATTTCTTGTCACTACCTCCTCGAATTGAGATTGGGTAATTTTCGCGCCTGCTGCCGTCC 179 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 || ||||| |||||| ||||||||||||||||||||||||| || || || |||||| Sbjct 180 TTAGATGTAGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCAGACACTGATCCCCCGT 237 >seq48244 Length=220 Score = 107 bits (118), Expect = 6e-21 Identities = 90/110 (82%), Gaps = 4/110 (4%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGT----CGGGATTGGGTAATTTGCGCGCCTGCTGCC 98 ||||| || || || |||| ||| | || |||||| ||||||||||||||||||| Sbjct 110 TATTTCTTTTCGCTGCCTCATCGTTTTTATCGACATTGGGCAATTTGCGCGCCTGCTGCC 51 Query 99 TTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 ||| | || |||||||| |||||||||||||||||||||||||||||| Sbjct 50 CTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCCTCTCCGGAATCGAACC 1 >seq105933 Length=1180 Score = 87.8 bits (96), Expect = 5e-15 Identities = 77/95 (81%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||| ||||| | ||||| | |||||| | Sbjct 1180 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCA 1122 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 | |||||| | ||||| | ||||||||||| Sbjct 1121 GTCCACTACACGGCCATCACTGGCTGATAGGGCAG 1087 Score = 86.0 bits (94), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 835 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 780 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| || |||| |||||||||||||||||||||| Sbjct 779 GGCTTAGTCCTTGAAACAAGCATATGACTACTGGCAG 743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508720420096