Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq101184 145 3e-30 >seq101184 Length=7008 Score = 145 bits (160), Expect = 3e-30 Identities = 472/725 (65%), Gaps = 10/725 (1%) Strand=Plus/Plus Query 28386 CACTGCCTGCCCGGACTGGGCAGAGC-GCCTGAAAAAGGGGCTGTCGATTATTCCGGCTC 28444 ||| ||||||| |||||| ||| || | |||| | | ||| || || ||||| | Sbjct 4202 CACCGCCTGCCTCGACTGG-CAGCGCAGGCTGATCGACCGCGAGTCAATCATCCCGGCGC 4260 Query 28445 CGATTTATCCGGACCAGGCTGCACATGCACTGGCGATTTTTAAACAACTGCGGATTGTGG 28504 | || | ||||| ||||| | || || || || || || || ||||||| | || | Sbjct 4261 CCATCTTCCCGGAGCAGGCCGAGCAAGCGCTCGCCATCTTCAAGGAACTGCGCGTCGTCG 4320 Query 28505 A--TGCACCGGGTAGCCCGACGTTCGGGGAGTCCTGTGCACCGTGGGTGTTTGACCTGGT 28562 | ||| |||| ||||| || ||||| || | || | | ||||||||| ||| | || Sbjct 4321 ACCTGC-CCGGCAAGCCC-ACCTTCGGCGACTGCTCGGAGCAGTGGGTGTTCGACTTTGT 4378 Query 28563 GGCGGCCCTGTTTGGCTCCTACGATGCGCAGACCGGTGTTCGCCATATCAAGGAAGTTTT 28622 || ||| | || ||| ||| || || | |||| | | ||| ||| Sbjct 4379 CGCCGCCATCTTCGGCGGCTATGACGCCGAAGCCGGCAAGCAGCTCATCCGCGAATACGG 4438 Query 28623 TATCCTTATCCCCAAGAAAAACTCGAAGTCCACGCTGGCCGCAGGGATCATGATGACTGC 28682 | || ||| |||||| ||| | |||||||| | ||||| || ||||| |||| || Sbjct 4439 GCTGCTGATCAGCAAGAAGAACACCAAGTCCACCATCGCCGCCGGCGTCATGCTGACGGC 4498 Query 28683 ACTGTTACTGAACTGGCGGCAGGCGGCGGGCTACACGATTCTGGCCCCGACAGTGGAGGT 28742 ||| | ||| |||||| ||| | | || || || || || || ||| || Sbjct 4499 GCTGATCCTGTGCTGGCGCGAGGAAGAAGAACACCTCATCCTCGCGCCCACCAAGGAAGT 4558 Query 28743 GGCAGCCCACGCCTTCAACCCTGCCAGGGATATGGTACGACGGGACGATGATCTGGATGA 28802 || | | || ||||||| || ||| | ||||| || |||| || ||| || Sbjct 4559 CGCCGACAACTCCTTCAAGCCCGCCGCCGCCATGGTGCGCGAGGACCCGGAGCTGACCGA 4618 Query 28803 CCTCTGTCAGGTGCAGACACATATCCGGACCATCACCCACCGGGTGACAGACACCACCCT 28862 || | || || ||| || |||||||||||||||||||| | | || || ||| Sbjct 4619 GCTGTTCCACGTCCAGGATCACATCCGGACCATCACCCACCGCCTCAACCGCAACAGCCT 4678 Query 28863 GAAGGTGGTGGCAGCCGATCCGAATACGGTGTCCGGTATCAAGTCCGTGGGTACGCTGAT 28922 ||||| || || || || | | ||||| ||||| | ||||||| | || | Sbjct 4679 CAAGGTTGTCGCTGCTGACACCGACACGGTCTCCGGCAAGAAGTCCGGCAAGATCCTTGT 4738 Query 28923 TGATGAGCTGTGGCTGTTTGGCAAGCAGTACAAGGCGGAGGACATGTTACGTGAAGCCAT 28982 || || || ||||| || ||||||| || ||| || | | |||||| |||||| | Sbjct 4739 CGACGAACTCTGGCTCTTCGGCAAGCGGTCCAACGCCGCCGCCATGTTCATCGAAGCCCT 4798 Query 28983 CGGTGGCCTTGCCTCCCGCCCGGAAGGGTTTGTGGTGTATACGACCACCCAGTCGAATGA 29042 ||| |||| | | |||| ||||| | || | || |||||||||| | || Sbjct 4799 CGGCGGCCAGGTCAGCCGCGACGAAGGCTGGGTCATCTACCTGACCACCCAGAGCGACGA 4858 Query 29043 ACCTCCCGCCGGGGTGTTCA--GACAGAAACTGCAGTACGCCCGGGATGTGCGCGACGGC 29100 | | |||||||| || |||| ||| | || | ||| || || |||||||||||| Sbjct 4859 AGCCCCCGCCGGCGTCTTCAAGGACCG--CCTCGACTACTGGCGCGACGTGCGCGACGGC 4916 Query 29101 AAAAT 29105 || || Sbjct 4917 AAGAT 4921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175313789950596