Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq107811 145 1e-29 seq15205 145 1e-29 seq67108 136 6e-27 seq105722 134 2e-26 seq26113 125 1e-23 seq73273 118 2e-21 seq28325 113 7e-20 seq23854 104 4e-17 seq71830 96.9 5e-15 >seq107811 Length=6275 Score = 145 bits (160), Expect = 1e-29 Identities = 179/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 196118 AAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCACAGATGCGCTTCGAT 196177 ||| | ||||| || ||||| ||||| ||| ||||| |||||||||||| || Sbjct 4832 AAAACCGACCGCACGGGCACCGGCACGGTCTCCGTGTTCGGCCACCAGATGCGCTTCAAT 4773 Query 196178 CTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCAT 196237 |||| || || || ||||| || || || ||||| || |||||| || ||||| ||| Sbjct 4772 TTGCAGGATGGTTTTCCGCTCGTGACGACCAAGAAGCTGCATCTGAAGTCGATCATCCAT 4713 Query 196238 GAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTC 196297 |||||| | |||||||| ||| |||||||||| || ||||| || ||||| ||| Sbjct 4712 GAACTGATCTGGTTCCTGGCGGGGTCCACCAACATCGGCTATCTGAAGGAAAACGGCGTC 4653 Query 196298 TCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAG 196357 |||||| |||||||||| | ||| ||| |||| || ||| | ||||| | ||| Sbjct 4652 AAGATCTGGGACGAGTGGGCCGATGAAAACGGCGACCTCGGTCCGATCTACGGCTACCAG 4593 Query 196358 TGGCG 196362 ||||| Sbjct 4592 TGGCG 4588 >seq15205 Length=1481 Score = 145 bits (160), Expect = 1e-29 Identities = 221/312 (71%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || ||||| || ||||| || || || || ||||| || || || ||||||||||| Sbjct 1481 TCCTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCTTTCAACATCGCC 1422 Query 196841 TCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTC 196900 || || |||||| ||| |||| || ||| || || || ||||| ||| Sbjct 1421 AGCTATGCGCTGCTGACAATGATGCTGGCCCAGCAGTGCGACCTGCAACTCGGCGACTTC 1362 Query 196901 GTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAAC-A 196959 | ||||| ||||| ||| ||||||||| ||| ||| |||| ||||| | ||| | | Sbjct 1361 ATCTGGACGGGCGGCGACTGTCACATCTACGACAACCACGTGGAGCAGGT-GCAGACCCA 1303 Query 196960 GCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTAT 197019 ||| | || | || | | | ||||| || | ||||||||| |||| || Sbjct 1302 GCTCGCCCGCGAGCCACGACCCTACCCGACCATGCTGATCAAACGCCGGCCGGCGTCGAT 1243 Query 197020 CTTCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGATTAA 197079 |||||| ||| | | ||| |||||||| ||| |||||||| ||||||||||| || || Sbjct 1242 CTTCGACTACGAGTACGAGGACTTCGAGCTGAGCGGCTACGAGCCGCATCCGGCCATCAA 1183 Query 197080 AGCCCCGGTGGC 197091 |||||||||||| Sbjct 1182 AGCCCCGGTGGC 1171 >seq67108 Length=1010 Score = 136 bits (150), Expect = 6e-27 Identities = 212/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 196789 GCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCGTCTTACGC 196848 |||||| ||||| || || || || ||||| || || || ||||||||||| || || Sbjct 1 GCTGTACCAGCGCAGCGCCGACATCTTCCTAGGCGTGCCCTTCAACATCGCCAGCTATGC 60 Query 196849 ATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTCGTTTGGAC 196908 ||||| | |||||||||||||| ||| | || ||| ||| || ||| | ||||| Sbjct 61 GTTGCTCACGCACATGGTGGCGCAGCAGTGTGACCTGGCCGTGGGTGACTTCATCTGGAC 120 Query 196909 TGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAACAGCTGTCTCG 196968 ||||| || ||| |||||| ||| ||| |||| ||||| | ||||| ||| || Sbjct 121 AGGCGGCGATTGCCATATCTACAGCAACCACGTGGACCAGGTGAACGAACAACTGAGCCG 180 Query 196969 TAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTATCTTCGATTA 197028 || | | | ||||| ||| ||||| ||||| |||| | ||||||| || Sbjct 181 CGCGCCCTACCCCTACCCGACTCTGCACATCAAGCGCAAGCCGGCCGATATCTTCAGCTA 240 Query 197029 CAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGATTAAAGCCCCGGT 197088 | | || || || ||||| || | | |||| | || ||||| || ||||||||||| Sbjct 241 CGAGTTTGAGGATTTCGAGGTGCTGGACTACCAATGCCACCCGGCCATCAAAGCCCCGGT 300 Query 197089 GGC 197091 ||| Sbjct 301 GGC 303 >seq105722 Length=466 Score = 134 bits (148), Expect = 2e-26 Identities = 180/243 (74%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTG-- 196180 || || || ||||| ||||| || | | | ||||| ||||| |||||||| ||| Sbjct 389 GATCGCACGGGCACGGGCACACTCGGCGTGT-TCGGCCGCCAGATCCGCTTCGACCTGGC 331 Query 196181 CAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCAT-GA 196239 |||| || || ||| | | ||||| ||||| || || ||||| || ||| ||||| || Sbjct 330 CAAG--GGCTTTCCGGTCCTGACCACCAAGAAGCTGCACCTGCGCTCGATC-TTCATCGA 274 Query 196240 ACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTC 196299 |||||||||||||| || || ||||||||| || || ||| | |||||| ||| Sbjct 273 GCTGCTGTGGTTCCTGAAGGGCGACACCAACGTCCGCTATCTGCAGGACAACAAGGTCCG 214 Query 196300 TATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTG 196359 |||||| |||||||||| ||||| ||| ||||||| || || ||||| ||||| || Sbjct 213 CATCTGGGACGAGTGGGCCGACGAAAACGGCGACCTGGGTCCCGTCTACGGCAAGCAATG 154 Query 196360 GCG 196362 ||| Sbjct 153 GCG 151 >seq26113 Length=815 Score = 125 bits (138), Expect = 1e-23 Identities = 180/249 (72%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 196117 CAAAGCTGACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCG 196175 |||| | ||||| |||||||| ||||| | | | | | | | | ||||||||||||| Sbjct 334 CAAAACCGACCGCACCGGCACCGGCACGCGCAGCGTGTTTGGCCAC-CAGATGCGCTTCG 276 Query 196176 ATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTC 196235 | ||| | || || || ||||| |||||||| ||||| | || ||||| |||||||| | Sbjct 275 ACCTGAACGAAGGCTTTCCGCTAGTCACCACCAAGAAGGTGCACCTGCGCTCCATCATCC 216 Query 196236 ATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTG 196295 | ||||||||||||||||| | || || | ||| ||| | ||||| || ||| | Sbjct 215 AGGAACTGCTGTGGTTCCTGCAGGGCAGCAGCGACAACAACTGGCTGAAGGAACGCGGCG 156 Query 196296 TCTCTATCTGGAACGAGTGGGCGAACGAAC--TCGGTAACCTGGGGCCGGTTTACGGTAA 196353 || |||||| |||| ||||| ||| | ||| | ||| || ||||| ||||| Sbjct 155 TCAGCATCTGGGACGAATGGGC--ACGGCCCGACGGCAGCCTAGGCCCGGTCTACGGCGT 98 Query 196354 GCAGTGGCG 196362 ||| ||||| Sbjct 97 GCAATGGCG 89 >seq73273 Length=4456 Score = 118 bits (130), Expect = 2e-21 Identities = 174/242 (72%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182 |||||||||||||| ||||| | | | | ||||| |||||||||||||| ||| Sbjct 327 GACCGTACCGGCACCGGCACCCGCAGCGTGT-TCGGCCACCAGATGCGCTTCGACCTGAG 269 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242 | || |||||||| |||||||| ||||| | || ||| |||||| | | || || Sbjct 268 CCAGGGCTTCCCGCTCGTCACCACCAAGAAGGTGCACCTGAAGTCCATCGTCCTGGAGCT 209 Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302 |||||||||||| || ||| ||||| |||||| ||| | || ||| || | || Sbjct 208 GCTGTGGTTCCTGCGTGGCGACTCCAACGTCAAGTGGCTGCAGGAGCGCGGCGTGACGAT 149 Query 196303 CTGGAACGAGTGGGCGAACGAAC--TCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGG 196360 ||||||||| |||||| || | ||| ||||||| || || || || ||||||| Sbjct 148 CTGGAACGAATGGGCG--CGGCCCGACGGCGACCTGGGCCCCGTCTATGGCGTGCAGTGG 91 Query 196361 CG 196362 || Sbjct 90 CG 89 >seq28325 Length=165 Score = 113 bits (124), Expect = 7e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 196214 CTCCATCTGCGTTCCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATC 196273 || |||||||| |||||||| ||||||||||| ||||||||||| || || || || || Sbjct 165 CTGCATCTGCGCTCCATCATCCATGAACTGCTATGGTTCCTCAAGGGCGAGACGAATATT 106 Query 196274 AAGTACCTGAATGACAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAAC 196333 ||||| || || || || || || |||||| | ||||||||| ||||| ||| | Sbjct 105 CGCTACCTCAAGGAAAATGGCGTTTCGATCTGGGATGAGTGGGCGGACGAAAACGGCGAG 46 Query 196334 CTGGGGCCGGTTTACGGTAAGCAGTGGCGT 196363 || || ||||| ||||| ||| |||||| Sbjct 45 CTTGGCCCGGTCTACGGCGCGCAATGGCGT 16 >seq23854 Length=6065 Score = 104 bits (114), Expect = 4e-17 Identities = 169/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 196124 GACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCA-CAGATGCGCTTCGATCTGCA 196182 |||||||||||||| ||||| | || |||| ||| |||||||| || || || Sbjct 446 GACCGTACCGGCACGGGCACGAAATCGGTGTTCGG-GCATCAGATGCGGTTTGACCTCGC 388 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242 |||||||| ||| || | || |||||||| || |||||| || ||||| || || Sbjct 387 CGACGGATTTCCGTTGCTGACGACGAAGAAGCTGCATCTGAAGTCGATCATCGTCGAGCT 328 Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302 |||||||||||| ||| || || || || | ||| | || ||| || | || Sbjct 327 GCTGTGGTTCCTGCGCGGCGAGACGAATGTCGCCTGGCTGCAGGAGCGCGGCGTGACCAT 268 Query 196303 CTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCG 196362 |||| |||| |||||| ||| || | || || ||||| |||||| |||| ||||| Sbjct 267 CTGGGACGAATGGGCGGACGCCAATGGCGATCTCGGCCCGGTCTACGGTCAGCAATGGCG 208 Query 196363 T 196363 | Sbjct 207 T 207 >seq71830 Length=566 Score = 96.9 bits (106), Expect = 5e-15 Identities = 167/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTACGTCCTATCTC-GGCGCACAGATGCGCTTCGATCTGCA 196182 |||||||||||||| ||||| | | | | | ||| || ||||| || || | | Sbjct 222 GACCGTACCGGCACCGGCACCAT-TAGTGTGTTTGGCTACCAAATGCGTTTTAATTTAAA 280 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242 |||||| ||||||||||| || || || || || || || || ||||| || || | Sbjct 281 AGACGGTTTCCCGCTGGTGACGACCAAAAAGCTGCACTTGAAATCGATCATCCACGAGTT 340 Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302 | | ||||| | | ||| || ||||| ||||| ||||| || || ||||| || || Sbjct 341 GATCTGGTTTTTGAGCGGTGATACCAATATCAAATACCTAAAAGATAACGGCGTAAAAAT 400 Query 196303 CTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCG 196362 ||| |||||||||| | | || ||||| |||||||| || || | || ||||| Sbjct 401 TTGGGACGAGTGGGCCGATGCCGATGGCAACCTCGGGCCGGTGTATGGGTACCAATGGCG 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770469946419720