Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq107653 264 1e-65 seq93596 86.0 7e-12 >seq107653 Length=176415 Score = 264 bits (292), Expect = 1e-65 Identities = 489/704 (69%), Gaps = 25/704 (4%) Strand=Plus/Minus Query 110330 GAGATGGGATTCAGCATCGAGAAGGTTACTGTAACCGCTC-GTGCTCGCGCCCTGAAAGC 110388 ||||||| ||||||||||||||||| || || || || | || ||||| ||| || Sbjct 133145 GAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGC-CGCGCGCTGGCCGC 133087 Query 110389 AGAATACAGCTTAGAGCTGGCACAGGACCTCAAGGCGATCCACGGTCTGGACGCTGAGCA 110448 || ||| | || |||||||||||||| ||||| | |||||||| ||||| ||| Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 110449 GGAACTGAGCAACATCCTCTCTACTGAGATCCTTGCTGAAATCAACAGAGAAGTTGTTCG 110508 || || ||||||||| | || |||||||| || || |||||| | || | ||||| Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 110509 TACTATCTACACCAACGCTGTTGCTGGTGCTCAGAACAATACCGCTAACGCTGGTATCTT 110568 ||| || ||| ||| || | |||| | | || | ||| | || |||| Sbjct 132966 TACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 110569 CGACCTCGATGTTGACTCCAACGGTCGCTGGTCTGTTGAGAAGTTCAAAGGTCTCCTGTT 110628 |||||| || || ||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 110629 CCAGATCGAAAGAGA-TGCTAACGCAATCGGTCAGCAAACTCGTCGTGGCAAGGGTAACA 110687 ||| ||||| | || ||| ||| |||| || | || | |||||||||||||||| Sbjct 132846 CCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACA 132788 Query 110688 TCCTGATCTGTTCTGCTGATGTTGCTTCTGCTCTGGGTATGGCTGGTGTACTTGATTACA 110747 |||||||||| | || || || || || |||||| || || ||| | | || Sbjct 132787 TCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGG-CTACCT--CTCCA 132731 Query 110748 CTCCTGCTCTTGCTGGTAACAACGGTCTGACTGGTGTTGATGATACCTCCAGCACTCTGG 110807 | | | | || ||| ||||| | | || || || || || ||| | | Sbjct 132730 -TGCCGAACCTG--GGTGACAACCTCCAG------GTCGACGACACGGGCAACACCTTCG 132680 Query 110808 TTGGTACTCTCAACGGTCGTATCAAGGTCTATGTTGACCCCTACTCTGCAAACGTTGCTG 110867 |||| || |||||||| ||||||||||| | ||||||||| || | || || | Sbjct 132679 CGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTAC---GCGATCG--GCGG 132625 Query 110868 ACAAGCACTTCTATGTTGCAGGTTACAAGGGTACTTCTCCTTATGACGCTGGTCTGTTCT 110927 | || || | | || ||| ||||||||| | | ||||| ||||| || | |||| Sbjct 132624 A-AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCCTTACGACGCCGGCATCTTCT 132569 Query 110928 ATTGCCCTTATGTACCTCTCCAGCAGGTTCGTGCAATTAACCCTAACACCTTCCAGCCCA 110987 | ||||| || || |||||||||||||||||||| | || | |||| || Sbjct 132568 ACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTC 132509 Query 110988 AGATCGGCTTCAAGACTCGCTACGGCATGGTCTCGAACCCCTTC 111031 |||||||||||||| ||||||||||||||| ||||||||||| Sbjct 132508 GCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTC 132465 >seq93596 Length=211 Score = 86.0 bits (94), Expect = 7e-12 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 156516 TAGCTCAGC-GGATAGAGCAACTGCCTTCTAAGCAGTTGGTCGCAGGTTCAAATCCTGC 156573 ||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct 14 TAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCAGGTGGTCGCAGGTTCGAATCCTGC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550609580467800