Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq107653 210 3e-49 >seq107653 Length=176415 Score = 210 bits (232), Expect = 3e-49 Identities = 483/715 (68%), Gaps = 37/715 (5%) Strand=Plus/Minus Query 140829 TGAGATGTCATTCAGCATCGAGAAGACCTCGGTCACCGCAAAGTCCAGAGCACTCAAAGC 140888 ||||||| | ||||||||||||||| | | ||||| || ||| | | || || || Sbjct 133146 TGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGC 133087 Query 140889 AGAGTACACCCTGGAACTGGCACAAGACCTCAAGGCGATCCATGGTCTCGATGCAGAGCA 140948 |||||| | ||||||||||||| ||||| ||||| | || |||||||| || ||| Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 140949 AGAACTTGCTAACATCCTGTCCAGCGAAGTTCTCGCAGAAATCAACCGTGAAGTCGTTCG 141008 || || | |||||||| ||| ||| | || || || |||||||| || | ||||| Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 141009 TACCGTCTACACCGTTGCAAAGAAAGGTGCTCAAAACAACGTAGCAACCCCTGGCGTATT 141068 ||| ||| ||| || ||| | || | || | | || | | ||| ||| | || Sbjct 132966 TACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 141069 TGACCTCGACGTTGACTCCAACGGTCGCTGGTCTGTTGAGAAATTCAAGGGTCTCCTCTT 141128 ||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 141129 CCAAATCGAGCGTGA-TGCTAACGCAATCGCACAAGAGACTCGTAGAGGAAAGGGCAACT 141187 ||| |||||||| || ||| ||| ||||| | ||||| | | || ||||| ||| Sbjct 132846 CCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACA 132788 Query 141188 TCCTGATCTGTTCAGCTGACGTTGCTTCTGCTCTTGCAATG--GCAGGCGTACTTGACTA 141245 |||||||||| | || ||||| || || ||||| || | || ||| ||| Sbjct 132787 TCCTGATCTGCACGGCGGACGTGGCATCGGCTCT--GAACGCCGCCGGC-TAC------- 132738 Query 141246 CTCTTCAGGTCTTAACGGTGCTGGTGGTCCTTCCATCGGTCAGGTTGATGACACTGGTAA 141305 |||| || | | ||| |||| | || | ||||| || ||||| || || Sbjct 132737 CTCTCCATG-CCGAAC----CTGG-----GTGACAACCTCCAGGTCGACGACACGGGCAA 132688 Query 141306 C-CTTTCAGTCGGTACTATCAACGGTCGCATCCGCGTCTACGTTGATCCTTATGCAGCAA 141364 | | ||| | |||| | |||||||||||| |||||| | || || || || Sbjct 132687 CACCTTC-GCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTACGC----- 132634 Query 141365 ACCTCTCCGATAAGCACTACTATGT-TATCGGTTATAAGGGCACTTCCCCTTATGATGCA 141423 || || | ||||| |||| | || || ||||| | | ||||| || || Sbjct 132633 -GATCGGCGGAA---ACTAC-ATGTGCGTAGGCTACAAGGGTCCGACGCCTTACGACGCC 132579 Query 141424 GGTCTCTTCTACTGCCCATACGTACCCCTCCAGATGGTTCGCTCGATCGATCCTAACAGC 141483 || ||||||||||||| ||||| || |||||| |||||| | | || | | Sbjct 132578 GGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAAC 132519 Query 141484 TTCCAACCAAAGATTGGTTTCAAGACTCGTTACGGCATGGTCAGCAACCCATTCG 141538 ||| || || || |||||||| || |||||||||||| ||||| |||| Sbjct 132518 TTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCG 132464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633198620874000