Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq107653 251 1e-61 seq49213 140 4e-28 seq11946 109 8e-19 seq38326 96.9 5e-15 >seq107653 Length=176415 Score = 251 bits (278), Expect = 1e-61 Identities = 471/683 (69%), Gaps = 18/683 (3%) Strand=Plus/Minus Query 107797 ATCGAGAAGCTTACTGTTACTGCTAAGAGTCGCGCACTCAAGGCTCAGTACAGCATGGAA 107856 ||||||||| | || || || || ||||| ||||| || || ||||| |||||| Sbjct 133130 ATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCCGAGTACTCGATGGAA 133071 Query 107857 CTCGCACAAGACCTTAAGGCAATCCACGGTCTAAATGCAGAAGCTGAGCTAGCTAACATT 107916 || ||||| ||||| |||||| | |||||||| | || || |||||||| | ||||| Sbjct 133070 CTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGCTGAGCTCTCGAACATC 133011 Query 107917 CTCTCCTCTGAGATCCTAGCTGAAATCAACCGCGAAGTCATCCGTACAGTATACAAGACT 107976 ||| || | |||||||| || || ||||||||||| | | ||||| || | | Sbjct 133010 CTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCGTACGGTCCTGACCTCC 132951 Query 107977 GCTGTTCCTGGTGCTCAGGCTAACGTTGCTCAAGCTGGCGTATTTGACCTTGACGTTGAC 108036 || | || | ||| || | | | ||| | || ||||| ||||| ||| Sbjct 132950 GCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTTCGACCTGGACGTCGAC 132891 Query 108037 TCCAACGGTCGCTGGTCTGTTGAGAAGTTCAAGGGTCT-TATCTTCCAAATGGAAAGAGA 108095 || ||||| |||||||| |||||||||||||||||||| ||| ||||| || || | || Sbjct 132890 TCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTAT-TTCCACATCGAGCGCGA 132832 Query 108096 CGCTAACGCAATCGCTCAGCAAACTCGTCGTGGGAAGGGCAACATCATCATCTGTTCCGC 108155 ||| ||||| || | || | ||||| ||||| |||||| | ||||| | || Sbjct 132831 GTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACATCCTGATCTGCACGGC 132772 Query 108156 AGATGTTGCTTCCGCTCT-AACTATGGCTGGTGTGCTTGAT-TACACCCCTGCTCTTAAC 108213 || || || || ||||| ||| || | | ||| | | || || || Sbjct 132771 GGACGTGGCATCGGCTCTGAAC----GCCGCCG-GCTACCTCTCCATGCCGAACCTGGGT 132717 Query 108214 GCCAACCTTAACGTTGACGACACCGGCAACCTATTCGCTGGTACTCTACAAGGTAAGTAC 108273 | |||||| | || |||||||| |||||| ||||| |||| || | ||| | Sbjct 132716 GACAACCTCCAGGTCGACGACACGGGCAACACCTTCGCGGGTATCCTGAACGGTCGCATC 132657 Query 108274 AAGGTCTACATCGATCCTTATGCTGCTAACGTATCCTCACAGCAGTTCTACGTTATGGGC 108333 |||||||||||||| || || || || | || ||| | | ||| ||| Sbjct 132656 AAGGTCTACATCGACCCCTACGCGATCGGCGGAAACT-ACA-----TGTGCGTA---GGC 132606 Query 108334 TACAAAGGTACTTCACCTTATGACGCTGGTCTATTCTACTGCCCTTACGTTCCTCTTCAG 108393 ||||| ||| | | ||||| ||||| || | ||||||||||| ||||||||||| ||| Sbjct 132605 TACAAGGGTCCGACGCCTTACGACGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCAG 132546 Query 108394 ATGGTTCGTGCAGTTGGTCAGGACACCTTCCAGCCTCGTATCGGCTTCAAGACTCGCTAC 108453 ||||||||| || | | || | |||| ||||| |||||||||||||| |||||| Sbjct 132545 CAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTAC 132486 Query 108454 GGCATGATCGCTAACCCATTCGC 108476 |||||| |||| ||||| ||||| Sbjct 132485 GGCATGGTCGCGAACCCCTTCGC 132463 Score = 100 bits (110), Expect = 4e-16 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 107428 CGCTCAATGCCTAACCTATTGGCTTACGACATCTGTGGTGTTCAGCCAATGAACGGTCCT 107487 ||||| ||||| ||||| |||| ||||||||| ||||| ||||| |||| |||||| Sbjct 133460 CGCTCCATGCCGAACCTGATGGCCTACGACATCATGGGTGTGCAGCCCATGACCGGTCCG 133401 Query 107488 ACTGGACTTATCTTCGCAATGCGTTCACGCTACGAAGGTCAGAACGGTCCCGAGACCTTC 107547 || || || |||||||| || || || ||||||| |||| || |||| ||||| Sbjct 133400 ACCGGCCTGATCTTCGCCATCCGCTCGCGCTACGGCTCGCAGACGGGCAACGAGGCCTTC 133341 Query 107548 TACAACGAAGTTGATTCTGCTTACTC--CGGTCA 107579 |||||||| || | | || ||||| |||||| Sbjct 133340 TACAACGAGGTCAACACCGCCTACTCTTCGGTCA 133307 >seq49213 Length=3341 Score = 140 bits (154), Expect = 4e-28 Identities = 359/542 (66%), Gaps = 6/542 (1%) Strand=Plus/Plus Query 162304 GTTCAACCAGATGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGAT 162363 || || ||||| ||||| || ||||||| || ||| ||||| ||||| || || Sbjct 2661 GTACAGCCAGACGAAATCTACAACCTAGCCGCGATGAGCCACGTGGCTGTTTCTTTCGAG 2720 Query 162364 CAGCCTGAATACACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTC 162423 ||||||||||| || | | |||| | |||||| | || | || |||||| || Sbjct 2721 ACACCTGAATACACCGCTAATGCAGACGGTATTGGCACTTTGCGGATCCTGGAAGCCATC 2780 Query 162424 CGTCTTCTTGGTATGGA--ATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTTT 162481 ||| |||| ||| |||| | | || | | ||||||||||| ||| ||||| | Sbjct 2781 CGTATTCTGGGTCTGGAGAAGAAAAC--ACGCTTCTACCAAGCGTCCACATCCGAGCTAT 2838 Query 162482 ATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTT 162541 |||| | || || ||||| || |||||||| ||||| || | || |||||| ||| | Sbjct 2839 ATGGCTTGGTGCAAGAGACTCCGCAGAAAGAGACCACACCTTTCTACCCACGAAGCCCAT 2898 Query 162542 ATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACA 162601 ||| |||||| ||| | || | |||||||| | || ||| | || || | Sbjct 2899 ATGCAGTTGCCAAAATGTACGCCTTCTGGATTACGGTGAATTACCGAGAGGCGTACAGTA 2958 Query 162602 TACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCG 162661 | |||||| | || ||||| || || ||||||||| | | | || || || |||| Sbjct 2959 TTTATGCCTGCAATGGCATTCTGTTTAACCACGAAAGCCCGATCCGGGGCGAAACCTTCG 3018 Query 162662 TCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCA-AAGTGATCTA 162720 | || ||||||||| || || ||| | || || | | || || | || | | Sbjct 3019 TGACGCGCAAGATCACTCGCGCGTTGGCGCGCATCAAGCTCAATCTTCAGGACTGCT-TG 3077 Query 162721 CAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCT 162780 | || || || | | | | ||||||||||| |||||||| ||||| || || Sbjct 3078 TACCTGGGCAATATGGACTCACTGCGTGACTGGGGCCACGCCAAGGACTATGTCGAAATG 3137 Query 162781 ATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAGCAG 162840 |||| ||||||| ||||| || | || || || | || || || || || | ||| Sbjct 3138 CAGTGGCTGATGCTGCAGCAGGAAACTCCTGAAGACTTCGTCATTGCCACCGGCGTGCAA 3197 Query 162841 TA 162842 || Sbjct 3198 TA 3199 >seq11946 Length=4023 Score = 109 bits (120), Expect = 8e-19 Identities = 346/533 (65%), Gaps = 4/533 (1%) Strand=Plus/Plus Query 162303 AGTTCAACCAGATGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGA 162362 ||| || |||||||| |||||||| | || ||| | || || || || ||||| Sbjct 2251 AGTACAGCCAGATGAGATATATAATTTGGGTGCTATGTCACATGTAAAAGTAAGTTTTGA 2310 Query 162363 TCAGCCTGAATACACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGT 162422 | || ||||| || ||| | |||||| | || ||| ||||| | | ||||| | Sbjct 2311 TACACCGGAATATACCGCAAATGCCGACGGTATTGGAACTTTAAGGATATTGGAAGCGAT 2370 Query 162423 CCGTCTTCTTGGTATGG--AATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTT 162480 || | | || || || | || ||| ||| ||||| || ||| || | Sbjct 2371 ACGGATATTAGGGTTGACTAAAAAGAC-TAA-AATATACCAGGCATCCACATCCGAATTG 2428 Query 162481 TATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCT 162540 ||||| | ||||| | || ||| |||||| ||||| | ||||| || || || Sbjct 2429 TATGGATTGGTTCAAGCTGTCCCTCAGTCAGAAACTACTCCGTTTTATCCGCGGTCGCCC 2488 Query 162541 TATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGAC 162600 || | |||||| ||||| |||| | ||||| | | ||| || | ||| ||||| | Sbjct 2489 TACGCAGTTGCAAAACTCTATGCCTATTGGATAACCGTAAATTATCGCGAAGCCTATGGC 2548 Query 162601 ATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTC 162660 || ||| | | ||| || ||||| ||||| ||||| || | || || || || Sbjct 2549 ATGTTTGCTTGCAACGGGATACTATTTAATCATGAAAGTCCATTGCGGGGCGAAACTTTT 2608 Query 162661 GTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTA 162720 || ||||| || || || || | || |||| |||| | |||| | | | Sbjct 2609 GTTACACGTAAAATAACGCGCGCTGCGGCCAAAATTGCCTTGGGTTTACAAAATAAATTG 2668 Query 162721 CAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCT 162780 | | || || || |||| | ||| || ||||| || || |||||||| || ||||| Sbjct 2669 TATTTGGGTAATCTTGATGCACAACGGGATTGGGGGCATGCAAAAGACTATGTCGAGGCA 2728 Query 162781 ATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGG 162833 |||| | || ||||||||||| | ||||| |||| ||| || || || || Sbjct 2729 ATGTATCTTATTCTTCAGCAAGATGAACCAGAAGATTTTGTAATAGCCACCGG 2781 >seq38326 Length=18890 Score = 96.9 bits (106), Expect = 5e-15 Identities = 230/340 (68%), Gaps = 12/340 (4%) Strand=Plus/Plus Query 163258 TTATGTAATCCTAGCTGCTGCCCTAGTCGGCGGCATTATGGCTAACAAGAC---TCGCAA 163314 |||||| | || |||||||| ||| ||||||||| | || || || || |||| Sbjct 10451 TTATGTTTTTCTTGCTGCTGCTAAAGTGGGCGGCATTGTAGCGAATAACACGTATCGC-- 10508 Query 163315 AGCGGAGTTCTTACACGACAATCTAATGATGCAGTGTAATGTAATTGACTCTGCTTACTA 163374 || || || || |||| ||||| || || ||| || || | || | || | Sbjct 10509 -GCCGACTTTTTGTACGAGAATCTTCAAATACAAAATAACGTTATACATTCATCGTA-TC 10566 Query 163375 TTCAG-GTGTTAAGAAGCTCCTATTCCTAGGAACATCTTGCATCTATCCTGC--TGGACG 163431 || | |||| | ||||| | || ||||| || ||| ||||||||| ||| || Sbjct 10567 TTAATAGTGTAACCAAGCTAATGTTTTTAGGATCAAGTTGTATCTATCCTAAAATGG-CG 10625 Query 163432 CCAACACCCACTAAAAGAAAATGAACTCCTTACGGGGGCTCTTGAGCCTACTAACGACGC 163491 ||| || ||| |||| || || | || | ||||| |||||||||||||| || | Sbjct 10626 CCA-CAGCCATTAAAGGAGGATTACCTGTTAACGGGTTTACTTGAGCCTACTAATGAGCC 10684 Query 163492 TTACGCCATCGCAAAGATCGCAGGAATCAAACAATGTGACTTCTACAGGGAGCAATATGG 163551 ||||||||| || || || ||||| || ||| || || ||| | | |||||||| Sbjct 10685 TTACGCCATTGCTAAAATTGCAGGCATAAAAATGTGCGATGCTTACCGTGCACAATATGG 10744 Query 163552 ATTTGATGCTATCTCTATTATGCCTCCTAATCTATATGGT 163591 || | | |||||| | |||||| |||| |||||||| Sbjct 10745 ATGTAACTATATCTCGGTGATGCCTACTAACTTATATGGT 10784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690498063068760