Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq370 199 3e-46
>seq370
Length=376741
Score = 199 bits (220), Expect = 3e-46
Identities = 379/555 (68%), Gaps = 5/555 (1%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| ||||| ||||||||||| | |||||| | || |
Sbjct 251271 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACCTC 251330
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||| | |||||||| | || ||| ||| | || | || |||||
Sbjct 251331 TCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGA-CAACGAGCGTCACTTCATCTC 251389
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|||||| | || ||||| ||||| ||||| ||||||||||| ||||| | |||| ||
Sbjct 251390 ACATGTCCTCGCCTTCTTCGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTGGAGCG 251449
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| | | || || || | | ||||| || |||||||| || ||||| || ||
Sbjct 251450 CTTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCATGAT 251509
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| |||| || |||| ||| | || ||||| || ||||||| ||| | ||
Sbjct 251510 GGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCCCGC 251569
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442
| || ||| | ||| | ||| | || || || || | ||| |||||| ||
Sbjct 251570 CCAGCGCGAATACCTCTTCGACGCCGTTGACACTATCCCTTGCATCAAGAAGAAAGCCGA 251629
Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502
||||| ||| |||||| || || | | |||| |||| ||||| | | || ||
Sbjct 251630 CTGGGCTCTCACCTGGATCTCCGATAAAGAGTCTACCTTTGCCGAACGTCTAGTTGCCTT 251689
Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562
|| | || ||||| | || ||| || || || || | ||||| |||||||||||
Sbjct 251690 CGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGTTGAAGAA 251749
Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622
||||| || |||||||| |||| ||| || ||| | || || || || |||||
Sbjct 251750 GCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTGATGAAGGCAT 251809
Query 61623 GCATTGTGATTTTGC 61637
|||| ||||||||
Sbjct 251810 GCATACCGATTTTGC 251824
Score = 156 bits (172), Expect = 3e-33
Identities = 295/431 (68%), Gaps = 10/431 (2%)
Strand=Plus/Minus
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|||||||||||| ||||||| || || ||||| ||||| | ||||||| ||| ||
Sbjct 250110 GCGTTCTTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTGGAACGCTTCTCGAGT 250051
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| ||||| | ||||||| ||||||||||| || || || ||| || || |||||
Sbjct 250050 GAAGTGCAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTG 249991
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392
||||| ||| ||| | || || || || ||||||| ||| | | ||||| ||
Sbjct 249990 CACTCCGAGGCGTATTCCCTCCTAATTGACACTTACATCAAGGATCCTGACGAACGGGAC 249931
Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTC 61452
| ||| || ||||| || || || | | |||| || || || ||||| ||
Sbjct 249930 TTTCTCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTG 249871
Query 61453 AATTGGAT---CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509
|| ||||| ||| ||| | | ||||| || || | | || || || |
Sbjct 249870 AAATGGATTTCTACCGAGACATCCG---CATTTTCGGAGCGGCTTGTTGCTTTCGCAGCA 249814
Query 61510 GTCGAGGG--TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567
|| || || | | ||||||| ||||| ||||| || ||||||||| ||| || || |
Sbjct 249813 GTGGAAGGCATTTTTTTTTCA--GGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAG 249756
Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATT 61627
|| | ||||| || |||| ||| ||| ||| | || ||||||||||||||||||
Sbjct 249755 GATTGATGCCAGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATA 249696
Query 61628 GTGATTTTGCT 61638
|||||||||
Sbjct 249695 CCGATTTTGCT 249685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564986186080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |