Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq370 199 3e-46 >seq370 Length=376741 Score = 199 bits (220), Expect = 3e-46 Identities = 379/555 (68%), Gaps = 5/555 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| ||||| ||||||||||| | |||||| | || | Sbjct 251271 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACCTC 251330 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | |||||||| | || ||| ||| | || | || ||||| Sbjct 251331 TCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGA-CAACGAGCGTCACTTCATCTC 251389 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||||| | || ||||| ||||| ||||| ||||||||||| ||||| | |||| || Sbjct 251390 ACATGTCCTCGCCTTCTTCGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTGGAGCG 251449 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | || || || | | ||||| || |||||||| || ||||| || || Sbjct 251450 CTTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCATGAT 251509 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||| || |||| ||| | || ||||| || ||||||| ||| | || Sbjct 251510 GGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCCCGC 251569 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | || ||| | ||| | ||| | || || || || | ||| |||||| || Sbjct 251570 CCAGCGCGAATACCTCTTCGACGCCGTTGACACTATCCCTTGCATCAAGAAGAAAGCCGA 251629 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 ||||| ||| |||||| || || | | |||| |||| ||||| | | || || Sbjct 251630 CTGGGCTCTCACCTGGATCTCCGATAAAGAGTCTACCTTTGCCGAACGTCTAGTTGCCTT 251689 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 || | || ||||| | || ||| || || || || | ||||| ||||||||||| Sbjct 251690 CGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGTTGAAGAA 251749 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622 ||||| || |||||||| |||| ||| || ||| | || || || || ||||| Sbjct 251750 GCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTGATGAAGGCAT 251809 Query 61623 GCATTGTGATTTTGC 61637 |||| |||||||| Sbjct 251810 GCATACCGATTTTGC 251824 Score = 156 bits (172), Expect = 3e-33 Identities = 295/431 (68%), Gaps = 10/431 (2%) Strand=Plus/Minus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 |||||||||||| ||||||| || || ||||| ||||| | ||||||| ||| || Sbjct 250110 GCGTTCTTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTGGAACGCTTCTCGAGT 250051 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || ||||| | ||||||| ||||||||||| || || || ||| || || ||||| Sbjct 250050 GAAGTGCAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTG 249991 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 ||||| ||| ||| | || || || || ||||||| ||| | | ||||| || Sbjct 249990 CACTCCGAGGCGTATTCCCTCCTAATTGACACTTACATCAAGGATCCTGACGAACGGGAC 249931 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTC 61452 | ||| || ||||| || || || | | |||| || || || ||||| || Sbjct 249930 TTTCTCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTG 249871 Query 61453 AATTGGAT---CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 || ||||| ||| ||| | | ||||| || || | | || || || | Sbjct 249870 AAATGGATTTCTACCGAGACATCCG---CATTTTCGGAGCGGCTTGTTGCTTTCGCAGCA 249814 Query 61510 GTCGAGGG--TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 || || || | | ||||||| ||||| ||||| || ||||||||| ||| || || | Sbjct 249813 GTGGAAGGCATTTTTTTTTCA--GGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAG 249756 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATT 61627 || | ||||| || |||| ||| ||| ||| | || |||||||||||||||||| Sbjct 249755 GATTGATGCCAGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATA 249696 Query 61628 GTGATTTTGCT 61638 ||||||||| Sbjct 249695 CCGATTTTGCT 249685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564986186080